Detailed information NTG0859409

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: WBI56_RS13915
• Genome accession: NZ_CP147492
• Coordinates: 2676405..2677010 (-)
• Length: 201 a.a.
• NCBI ID: WP_014477531.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain MC4-2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2671405..2682010

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WBI56_RS13885 (WBI56_13885)	-	2672218..2672607 (+)	390	WP_338730637.1	TIGR04086 family membrane protein	-
WBI56_RS13890 (WBI56_13890)	yajC	2672664..2672930 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
WBI56_RS13895 (WBI56_13895)	tgt	2672967..2674112 (-)	1146	WP_338730638.1	tRNA guanosine(34) transglycosylase Tgt	-
WBI56_RS13900 (WBI56_13900)	queA	2674139..2675167 (-)	1029	WP_106073630.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
WBI56_RS13905 (WBI56_13905)	yrzS	2675197..2675397 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
WBI56_RS13910 (WBI56_13910)	ruvB	2675390..2676394 (-)	1005	WP_046381239.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
WBI56_RS13915 (WBI56_13915)	ruvA	2676405..2677010 (-)	606	WP_014477531.1	Holliday junction branch migration protein RuvA	Machinery gene
WBI56_RS13920 (WBI56_13920)	bofC	2677149..2677661 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
WBI56_RS13925 (WBI56_13925)	csbX	2677709..2679016 (-)	1308	WP_003246197.1	MFS transporter	-
WBI56_RS13930 (WBI56_13930)	iolG	2679087..2680112 (-)	1026	WP_338730639.1	inositol 2-dehydrogenase	-
WBI56_RS13935 (WBI56_13935)	yrzF	2680350..2680997 (+)	648	WP_338730640.1	phosphotransferase	-
WBI56_RS13940 (WBI56_13940)	-	2681043..2681165 (-)	123	WP_003229707.1	hypothetical protein	-
WBI56_RS13945 (WBI56_13945)	-	2681250..2681324 (+)	75	Protein_2699	hypothetical protein	-
WBI56_RS13950 (WBI56_13950)	-	2681328..2681696 (+)	369	WP_338734168.1	DUF5412 family protein	-
WBI56_RS13955 (WBI56_13955)	-	2681703..2681843 (+)	141	WP_017696343.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22585.07 Da
• Isoelectric Point: 5.1805

>NTDB_id=859409 WBI56_RS13915 WP_014477531.1 2676405..2677010(-) (ruvA) [Bacillus subtilis strain MC4-2]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIEDEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=859409 WBI56_RS13915 WP_014477531.1 2676405..2677010(-) (ruvA) [Bacillus subtilis strain MC4-2]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTCATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAGATGAGGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• Helix-hairpin-helix domain (HHH_5) (69-126)

• RuvA N terminal domain (RuvA_N) (1-59)

• RuvA, C-terminal domain (RuvA_C) (155-199)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	99.502	100	0.995
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408