Detailed information NTG0858239

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: Q3O83_RS17125
• Genome accession: NZ_CP130445
• Coordinates: 3448031..3449194 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain C6.7
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3443031..3454194

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q3O83_RS17095 (Q3O83_17095)	-	3443296..3443715 (-)	420	WP_069473598.1	TIGR03826 family flagellar region protein	-
Q3O83_RS17100 (Q3O83_17100)	comFC	3443789..3444478 (-)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
Q3O83_RS17105 (Q3O83_17105)	-	3444484..3444768 (-)	285	WP_057080260.1	competence protein ComFB	-
Q3O83_RS17110 (Q3O83_17110)	comFA	3444826..3446211 (-)	1386	WP_069473599.1	DEAD/DEAH box helicase	Machinery gene
Q3O83_RS17115 (Q3O83_17115)	-	3446319..3447167 (-)	849	WP_043867471.1	DegV family protein	-
Q3O83_RS17120 (Q3O83_17120)	degU	3447265..3447954 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
Q3O83_RS17125 (Q3O83_17125)	degS	3448031..3449194 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
Q3O83_RS17130 (Q3O83_17130)	-	3449417..3450064 (+)	648	WP_043867472.1	YigZ family protein	-
Q3O83_RS17135 (Q3O83_17135)	-	3450069..3451283 (+)	1215	WP_043867473.1	LCP family protein	-
Q3O83_RS17140 (Q3O83_17140)	-	3451373..3452449 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
Q3O83_RS17145 (Q3O83_17145)	-	3452582..3453778 (-)	1197	WP_003151381.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=858239 Q3O83_RS17125 WP_003151385.1 3448031..3449194(-) (degS) [Bacillus amyloliquefaciens strain C6.7]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=858239 Q3O83_RS17125 WP_003151385.1 3448031..3449194(-) (degS) [Bacillus amyloliquefaciens strain C6.7]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGGGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GTACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948