Detailed information NTG0085805

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: I0P84_RS04910
• Genome accession: NZ_AP024524
• Coordinates: 1005260..1007716 (+)
• Length: 818 a.a.
• NCBI ID: WP_214002030.1
• Uniprot ID: -
• Organism: Acinetobacter variabilis strain RYU24
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1000260..1012716

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I0P84_RS04885 (RYU24_09510)	-	1001257..1001742 (+)	486	WP_005236716.1	YaiI/YqxD family protein	-
I0P84_RS04890 (RYU24_09520)	-	1001758..1002651 (+)	894	WP_208462178.1	DMT family transporter	-
I0P84_RS04895 (RYU24_09530)	-	1002674..1003237 (-)	564	WP_214002028.1	PilZ domain-containing protein	-
I0P84_RS04900 (RYU24_09540)	-	1003264..1004499 (+)	1236	WP_034170943.1	lipoprotein-releasing ABC transporter permease subunit	-
I0P84_RS04905 (RYU24_09550)	lolD	1004492..1005175 (+)	684	WP_214002029.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
I0P84_RS04910 (RYU24_09560)	comA/comEC	1005260..1007716 (+)	2457	WP_214002030.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
I0P84_RS04915 (RYU24_09570)	-	1007709..1008683 (-)	975	WP_214002031.1	lysophospholipid acyltransferase family protein	-
I0P84_RS04920 (RYU24_09580)	sppA	1008811..1009833 (+)	1023	WP_034702824.1	signal peptide peptidase SppA	-
I0P84_RS04925 (RYU24_09590)	-	1009830..1010633 (+)	804	WP_034702822.1	alpha/beta fold hydrolase	-
I0P84_RS04930 (RYU24_09600)	purN	1010697..1011326 (-)	630	WP_034702820.1	phosphoribosylglycinamide formyltransferase	-
I0P84_RS04935 (RYU24_09610)	purM	1011333..1012403 (-)	1071	WP_034702818.1	phosphoribosylformylglycinamidine cyclo-ligase	-

Sequence

Protein

• Length: 818 a.a.
• Molecular weight: 93632.25 Da
• Isoelectric Point: 8.9044

>NTDB_id=85805 I0P84_RS04910 WP_214002030.1 1005260..1007716(+) (comA/comEC) [Acinetobacter variabilis strain RYU24]
MLQWLCLGWILGLACMGKNFLNIHLNPITVIFLTVLCYLCGFKCNAILKKPLHKGLLVGTCILIGIFLGHGYANQQLSQR
LLNVEHEVQQKDIIVYVKRLNKLGDQSIQQPLEVLNHDGRTVTWMGFLSVKPPNTSQLSANHENLNTLELGQYYRLQGQV
RPNHSYATPDAFDAEKWALQQNVMAGFRIKQIEQLDSATVSTLGHSQYIREQRALTQQFLLWVEQKRLQLREFIAKQPVQ
NKGLLLALLTGDESLLNPATEQQFRRMGMSHLLAISGPHVLIFALMVCSVLRLFIARSMPQLYLRWPRQYFLALPFLFCV
VLYCAFVGFEIPAIRTLLICMIGVLLMLLRQNLQALKLLILSAALLLFIDPFSILSAAFWLSYGACFVLLRIYQTIQQRP
SEQNQTAIQKLYFAAKVLVESQWKIFLALFPLMMLFFKQIAWITPFSNLVAIPWIGLLIVPIDILAAMIFFIAEPVSSML
FQLNDLLLNILLGFLNLLDHWFKPQLIPVAMNLWMIGLSILSLLILFLPHGVLPKSWMAVAVVPICIPQFYHPPFQLSVL
DVGQGQAIFLRHGAYNMMIDMGGYYDEEKFSIGKQVIMPFLSVQGVSQLDQLILTHLDQDHSGAYHSIKDQLKIQNIYAN
EVTETAASSNFQLCYQGQQWQWQNDLQIKVIAPKLEQLNATNFNKNDLSCVVYLQLKNVWPYQNFLLMGDAGWQTEYQLL
KDYPDLKVDVLVLGHHGSQHSSAYQFLQHYRPKLAIASAGRFNRYGHPSQLTQQRLKELEIPLLTTAEHGSLHFSQQGTQ
IILETERSRWKWLQKKSK

Nucleotide

• Length: 2457 bp

>NTDB_id=85805 I0P84_RS04910 WP_214002030.1 1005260..1007716(+) (comA/comEC) [Acinetobacter variabilis strain RYU24]
ATGTTGCAATGGCTGTGTCTGGGCTGGATTTTAGGTCTGGCCTGTATGGGAAAAAATTTCCTCAATATTCATTTAAATCC
AATAACAGTCATATTTCTCACAGTACTTTGCTATCTGTGTGGTTTTAAATGTAATGCGATTCTGAAAAAGCCCTTACATA
AAGGATTGCTGGTAGGCACCTGCATTCTAATCGGGATATTTCTGGGACATGGTTATGCCAATCAACAGCTCAGCCAACGG
CTATTAAATGTCGAGCATGAAGTACAGCAAAAAGACATTATCGTTTATGTCAAACGCTTGAATAAACTCGGTGATCAATC
TATACAGCAGCCTTTGGAAGTATTAAACCATGATGGACGCACGGTAACCTGGATGGGTTTTCTATCTGTAAAACCTCCGA
ATACTTCACAACTATCAGCGAATCATGAAAATTTAAATACGCTTGAACTGGGTCAGTATTACCGGCTGCAAGGTCAGGTA
CGTCCTAATCACAGTTATGCAACGCCCGATGCTTTTGATGCTGAAAAATGGGCACTGCAACAGAATGTGATGGCCGGTTT
CCGGATCAAGCAGATAGAGCAACTTGATTCAGCTACTGTTTCTACACTGGGGCATAGTCAGTATATTCGAGAGCAAAGAG
CTTTAACTCAGCAATTTCTACTTTGGGTAGAACAAAAACGGCTGCAATTAAGAGAGTTCATAGCAAAGCAACCTGTACAA
AATAAAGGTCTGCTTCTGGCTTTGCTCACCGGAGATGAAAGCCTTTTAAATCCTGCAACTGAGCAGCAATTTCGACGTAT
GGGGATGAGTCACTTGCTCGCGATTTCTGGCCCACATGTGCTGATCTTTGCCCTGATGGTCTGCTCCGTACTTCGATTAT
TCATTGCTCGAAGTATGCCTCAGCTTTATCTAAGATGGCCACGCCAGTATTTTCTGGCTTTGCCGTTTCTGTTTTGTGTG
GTGCTGTACTGTGCCTTTGTGGGTTTTGAAATCCCGGCAATCCGCACTCTGCTGATCTGTATGATTGGCGTTCTTCTCAT
GCTGCTCCGACAAAATCTGCAGGCTTTAAAACTTCTGATTCTGAGCGCTGCCTTACTGTTATTCATTGATCCCTTTAGTA
TCTTGTCCGCGGCTTTCTGGCTGTCCTATGGGGCCTGTTTTGTATTGCTCAGAATTTATCAGACCATTCAACAGCGACCA
TCCGAGCAAAATCAGACAGCAATACAAAAACTGTATTTTGCAGCTAAAGTGCTGGTGGAATCACAGTGGAAAATCTTTCT
CGCTTTATTTCCTTTAATGATGCTGTTTTTTAAGCAGATTGCTTGGATCACGCCGTTCAGCAATCTGGTCGCAATCCCTT
GGATCGGTCTGCTGATTGTACCGATCGATATTCTGGCAGCGATGATATTTTTTATCGCTGAACCGGTGTCAAGCATGCTA
TTTCAGCTTAATGATCTGTTGCTGAATATCCTGTTGGGATTCTTAAACCTGCTAGATCACTGGTTTAAACCGCAGTTAAT
TCCAGTTGCGATGAATCTCTGGATGATTGGACTATCTATCCTGTCTTTGCTGATTTTATTCTTACCACATGGAGTATTGC
CAAAATCCTGGATGGCTGTGGCGGTAGTACCAATTTGTATTCCTCAATTCTATCATCCACCATTTCAGCTTTCGGTGCTG
GACGTTGGGCAAGGGCAGGCGATATTCCTCCGTCATGGAGCCTATAACATGATGATCGATATGGGCGGTTATTATGATGA
GGAAAAATTTAGTATTGGAAAGCAGGTAATCATGCCATTTCTGTCGGTACAGGGTGTTTCTCAACTGGATCAACTGATTT
TAACGCATCTGGATCAGGACCATAGTGGTGCTTATCACAGCATTAAAGACCAGCTCAAGATTCAGAATATCTATGCCAAT
GAAGTGACCGAAACTGCAGCCTCTTCAAACTTTCAATTATGTTATCAGGGACAGCAGTGGCAATGGCAGAATGATCTGCA
GATTAAGGTCATTGCACCAAAACTAGAACAATTAAATGCCACTAATTTCAATAAAAATGACCTGTCTTGCGTGGTGTATT
TGCAGCTCAAAAATGTCTGGCCGTATCAGAATTTTCTGCTGATGGGAGATGCAGGTTGGCAGACTGAATATCAGTTACTC
AAAGATTATCCTGATTTAAAAGTGGATGTCTTGGTCTTAGGCCATCATGGCAGTCAGCACAGTTCAGCTTATCAATTCTT
GCAGCATTATCGTCCTAAACTGGCGATTGCGTCTGCAGGAAGATTTAACCGTTACGGGCATCCAAGTCAGTTGACCCAGC
AGCGGCTCAAAGAATTGGAAATTCCTTTATTGACTACAGCAGAGCATGGCAGCCTGCATTTCTCTCAGCAAGGAACTCAA
ATCATTCTAGAAACTGAAAGAAGTCGCTGGAAGTGGTTACAAAAAAAATCTAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (30-195)

• Competence protein (Competence) (248-530)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baylyi ADP1	48.418	100	0.487
comA/comEC	Acinetobacter baumannii D1279779	47.515	100	0.479
comA/comEC	Acinetobacter baumannii strain A118	46.788	100	0.472