Detailed information NTG0857581

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: Q2B68_RS18180
• Genome accession: NZ_CP130280
• Coordinates: 3637216..3638379 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain PM415
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3632216..3643379

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q2B68_RS18150 (Q2B68_18150)	-	3632481..3632900 (-)	420	WP_057080259.1	TIGR03826 family flagellar region protein	-
Q2B68_RS18155 (Q2B68_18155)	comFC	3632974..3633663 (-)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
Q2B68_RS18160 (Q2B68_18160)	-	3633669..3633953 (-)	285	WP_057080260.1	competence protein ComFB	-
Q2B68_RS18165 (Q2B68_18165)	comFA	3634011..3635396 (-)	1386	WP_302565017.1	DEAD/DEAH box helicase	Machinery gene
Q2B68_RS18170 (Q2B68_18170)	-	3635504..3636352 (-)	849	WP_003151387.1	DegV family protein	-
Q2B68_RS18175 (Q2B68_18175)	degU	3636450..3637139 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
Q2B68_RS18180 (Q2B68_18180)	degS	3637216..3638379 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
Q2B68_RS18185 (Q2B68_18185)	-	3638602..3639249 (+)	648	WP_003151384.1	YigZ family protein	-
Q2B68_RS18190 (Q2B68_18190)	-	3639254..3640468 (+)	1215	WP_003151383.1	LCP family protein	-
Q2B68_RS18195 (Q2B68_18195)	-	3640558..3641634 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
Q2B68_RS18200 (Q2B68_18200)	-	3641767..3642963 (-)	1197	WP_103695179.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=857581 Q2B68_RS18180 WP_003151385.1 3637216..3638379(-) (degS) [Bacillus amyloliquefaciens strain PM415]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=857581 Q2B68_RS18180 WP_003151385.1 3637216..3638379(-) (degS) [Bacillus amyloliquefaciens strain PM415]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTGAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGACGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCTACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTTGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948