Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   STYK_RS06160 Genome accession   NZ_AP024523
Coordinates   1191627..1192436 (-) Length   269 a.a.
NCBI ID   WP_004254224.1    Uniprot ID   A0A7X1V467
Organism   Streptococcus toyakuensis strain TP1632     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1186627..1197436
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STYK_RS06135 (STYK_11610) - 1188004..1189722 (+) 1719 WP_261804712.1 phospho-sugar mutase -
  STYK_RS06140 (STYK_11620) - 1189834..1190181 (+) 348 WP_023944304.1 thioredoxin -
  STYK_RS06145 (STYK_11630) - 1190219..1190992 (-) 774 WP_261804713.1 potassium channel family protein -
  STYK_RS06150 (STYK_11640) - 1191038..1191292 (-) 255 WP_191962389.1 type II toxin-antitoxin system RelE family toxin -
  STYK_RS06155 (STYK_11650) relB 1191294..1191536 (-) 243 WP_000208079.1 type II toxin-antitoxin system RelB family antitoxin -
  STYK_RS06160 (STYK_11660) vicX 1191627..1192436 (-) 810 WP_004254224.1 MBL fold metallo-hydrolase Regulator
  STYK_RS06165 (STYK_11670) micB 1192429..1193787 (-) 1359 WP_261804714.1 cell wall metabolism sensor histidine kinase VicK Regulator
  STYK_RS06170 (STYK_11680) micA 1193780..1194487 (-) 708 WP_000722071.1 response regulator YycF Regulator
  STYK_RS06175 (STYK_11690) mutY 1194542..1195717 (-) 1176 WP_261804715.1 A/G-specific adenine glycosylase -
  STYK_RS06180 (STYK_11700) pta 1195906..1196880 (-) 975 WP_000451571.1 phosphate acetyltransferase -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29898.87 Da        Isoelectric Point: 6.1738

>NTDB_id=85747 STYK_RS06160 WP_004254224.1 1191627..1192436(-) (vicX) [Streptococcus toyakuensis strain TP1632]
MSETGFKYSILASGSSGNSFYLETPKKKLLVDAGLSGKKITSLLAEINRKPEDLDAILITHEHSDHIHGVGVLARKYGMD
LYANEKTWQAMENSKYLGKVDASQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRFMKDDKSFVLLTDTGYVSDRMAG
IVENADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGAEAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVN
QLAQADLGVGIDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=85747 STYK_RS06160 WP_004254224.1 1191627..1192436(-) (vicX) [Streptococcus toyakuensis strain TP1632]
ATGAGTGAAACAGGCTTTAAATACAGTATTTTAGCGTCGGGTTCCAGTGGAAATTCCTTTTATCTGGAAACCCCAAAAAA
GAAACTTTTAGTGGATGCAGGCTTGTCGGGCAAGAAAATTACCAGCTTACTTGCTGAAATAAATCGCAAACCAGAGGACT
TGGATGCCATCTTGATTACGCATGAGCATTCTGACCATATTCATGGAGTGGGTGTTTTGGCTCGCAAGTATGGTATGGAT
TTGTACGCCAATGAAAAGACCTGGCAGGCTATGGAAAATAGCAAGTATCTTGGCAAGGTGGATGCCTCGCAAAAGCATAT
TTTTGAAATGGGCAAAACCAAAACATTTGGAGATATTGATATTGAGAGTTTTGGTGTTAGCCATGATGCGGTCGCACCGC
AGTTCTATCGCTTTATGAAGGATGACAAGAGTTTTGTCCTTTTGACAGATACAGGTTATGTTAGTGACCGTATGGCAGGA
ATTGTCGAGAATGCAGATGGCTATCTTATCGAGTCCAACCATGATGTAGAGATTTTGCGAGCAGGTTCTTACGCTTGGCG
ACTCAAACAACGAATCCTATCGGATCTGGGTCACCTTTCTAACGAGGACGGTGCTGAAGCTATGATTCGGACGCTAGGAA
ATCGCACTAAGAAAATCTATCTTGGTCACTTGTCTAAGGAAAACAATATCAAGGAACTGGCTCACATGACCATGGTCAAT
CAGCTGGCGCAAGCTGATTTGGGAGTTGGAATAGACTTTAAAGTATATGATACTTCACCAGATACAGCAACACCATTGAC
AGATATATAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7X1V467

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

78.067

100

0.781

Multiple sequence alignment