Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   STYK_RS01390 Genome accession   NZ_AP024523
Coordinates   267649..268659 (+) Length   336 a.a.
NCBI ID   WP_261805102.1    Uniprot ID   -
Organism   Streptococcus toyakuensis strain TP1632     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 262649..273659
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STYK_RS01365 (STYK_02370) folP 263241..264221 (+) 981 WP_261805100.1 dihydropteroate synthase -
  STYK_RS01370 (STYK_02380) - 264223..265545 (+) 1323 WP_084923163.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -
  STYK_RS01375 (STYK_02390) folE 265526..266080 (+) 555 WP_084923161.1 GTP cyclohydrolase I FolE -
  STYK_RS01380 (STYK_02400) folK 266239..267051 (+) 813 WP_261805101.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  STYK_RS01385 (STYK_02410) - 267096..267413 (-) 318 WP_000886035.1 DUF960 domain-containing protein -
  STYK_RS01390 (STYK_02420) ccpA 267649..268659 (+) 1011 WP_261805102.1 catabolite control protein A Regulator
  STYK_RS01395 (STYK_02430) - 268713..269675 (-) 963 WP_261805103.1 asparaginase -
  STYK_RS01400 (STYK_02440) - 269741..271132 (+) 1392 WP_173226005.1 Cof-type HAD-IIB family hydrolase -
  STYK_RS01405 - 271129..271251 (+) 123 WP_031222600.1 hypothetical protein -
  STYK_RS01410 (STYK_02450) - 271324..271776 (-) 453 WP_173226007.1 universal stress protein -
  STYK_RS01415 (STYK_02460) - 271937..272230 (+) 294 WP_173226009.1 hypothetical protein -
  STYK_RS01420 (STYK_02470) - 272387..273601 (+) 1215 WP_261805104.1 pyridoxal phosphate-dependent aminotransferase -

Sequence


Protein


Download         Length: 336 a.a.        Molecular weight: 37181.20 Da        Isoelectric Point: 5.1838

>NTDB_id=85719 STYK_RS01390 WP_261805102.1 267649..268659(+) (ccpA) [Streptococcus toyakuensis strain TP1632]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITNGYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEYQLPS
VNIDYKQATIDAVTYLAKENERIAFVSGPLVDDINGKVRLVGYKEALKKAGISYSEGLVFESKYTYEDGYALAERLISSN
ATAAVVTGDELAAGVLNGLADKGVSVPEEFEIITSDDSQVSRFTRPNLTTIAQPLYDLGAISMRMLTKIMHKEELEEREV
LLPHGLTERRSTRKRK

Nucleotide


Download         Length: 1011 bp        

>NTDB_id=85719 STYK_RS01390 WP_261805102.1 267649..268659(+) (ccpA) [Streptococcus toyakuensis strain TP1632]
ATGAATACAGACGATACAGTAACGATTTATGATGTCGCCCGTGAAGCAGGAGTTTCAATGGCGACGGTTAGCCGTGTAGT
CAACGGCAATAAGAATGTAAAAGAGAATACTCGTAAAAAAGTACTTGAGGTGATTGATCGTTTGGATTACCGTCCAAATG
CTGTGGCGCGTGGTCTTGCAAGTAAAAAGACAACCACTGTCGGTGTGGTGATCCCAAATATTACCAATGGTTATTTCTCA
ACGCTTGCCAAAGGAATTGATGATATCGCTGAAATGTACAAGTACAATATTGTCCTTGCTAATAGTGATGAGGACGATGA
CAAGGAAGTTTCAGTTGTCAATACACTATTTTCTAAGCAAGTGGATGGTATCATCTTTATGGGCTACCACTTGACTGAAA
AAATTCGTTCAGAGTTTTCTCGTTCTCGAACACCAGTTGTTCTTGCAGGAACAGTAGATGTGGAGTACCAACTTCCAAGT
GTTAATATTGACTACAAACAAGCAACGATTGATGCAGTGACCTACCTTGCTAAAGAAAATGAGCGCATTGCTTTCGTTAG
CGGTCCATTAGTGGATGACATCAATGGTAAGGTTCGTTTGGTTGGCTACAAGGAAGCCTTGAAAAAAGCAGGGATTTCTT
ATAGCGAAGGATTGGTATTTGAGTCTAAATACACTTATGAAGATGGCTATGCCTTGGCAGAACGCTTGATTTCATCAAAC
GCAACTGCAGCAGTTGTAACAGGTGATGAATTGGCAGCAGGTGTCTTGAACGGCCTTGCTGATAAGGGTGTGTCAGTACC
AGAAGAATTTGAAATCATTACTAGTGATGATTCACAAGTCTCACGCTTTACCCGTCCAAACTTGACCACTATTGCCCAAC
CTCTTTATGACCTTGGCGCCATTAGTATGCGTATGTTGACTAAGATTATGCACAAGGAAGAGTTGGAAGAACGTGAAGTT
CTCTTACCTCATGGTTTGACAGAACGTCGCTCAACACGAAAACGTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

94.94

100

0.949

  ccpA Streptococcus gordonii str. Challis substr. CH1

88.922

99.405

0.884

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.704

98.512

0.568


Multiple sequence alignment