Detailed information NTG0855982

Bioinformatically predicted

Overview

• Name: comFA/cflA
• Type: Machinery gene
• Locus tag: QZN14_RS01935
• Genome accession: NZ_CP129875
• Coordinates: 347008..348297 (+)
• Length: 429 a.a.
• NCBI ID: WP_000432955.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae COH1
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 342008..353297

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QZN14_RS01915	-	343315..343983 (+)	669	WP_000394890.1	fructose-6-phosphate aldolase	-
QZN14_RS01920	-	344051..345139 (+)	1089	WP_000862112.1	glycerol dehydrogenase	-
QZN14_RS01925	cysK	345291..346217 (-)	927	WP_000036952.1	cysteine synthase A	-
QZN14_RS01930	-	346308..346952 (-)	645	WP_001108150.1	YigZ family protein	-
QZN14_RS01935	comFA/cflA	347008..348297 (+)	1290	WP_000432955.1	DEAD/DEAH box helicase	Machinery gene
QZN14_RS01940	-	348297..348963 (+)	667	Protein_314	ComF family protein	-
QZN14_RS01945	raiA	349040..349594 (+)	555	WP_000599096.1	ribosome-associated translation inhibitor RaiA	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 48713.62 Da
• Isoelectric Point: 10.0898

>NTDB_id=855982 QZN14_RS01935 WP_000432955.1 347008..348297(+) (comFA/cflA) [Streptococcus agalactiae COH1]
MENYLGRLWTKAQLSEQLRKIAINLPSFIKKGSDYICTRCSSSVAKNCQLPTGNYYCRECIVFGRVTSNENLYYFPQKTF
SKTNSLKWKGGLTPYQNEVSEELLKGISSKENLLVHAVTGAGKTEMIYHSIAKVIDTGGSVCIASPRIDVCLELHKRLSN
DFRCAITLMHGESPSYQRSPLTIATTHQLLKFYHAFDLLIVDEVDAFPYVDNPILYHGVKQALKKNGTSIFLTATSTTEL
ERKVARKELKKLHLARRFHANPLVIPEMVWVSGIQKSLQTQKLPPKLYQLINKQRQTRYPLLLFFPHIAEGQVFTEMLRQ
AFPMEKIGFVSSKSTSRLKLVQDFRDNKLSILVSTTILERGVTFPSVDVFVIQANHHLFTKSSLVQISGRVGRALERPEG
LLYFLHDGKSKSMHQAIKEIKNMNHIGGF

Nucleotide

• Length: 1290 bp

>NTDB_id=855982 QZN14_RS01935 WP_000432955.1 347008..348297(+) (comFA/cflA) [Streptococcus agalactiae COH1]
ATGGAAAATTATTTAGGTAGACTTTGGACAAAAGCACAATTATCTGAGCAACTTAGAAAAATTGCAATTAACTTGCCATC
TTTTATAAAGAAAGGAAGCGACTATATTTGTACTCGATGCTCTAGTTCTGTTGCCAAAAATTGCCAATTACCAACTGGAA
ATTATTATTGTAGAGAATGTATAGTTTTTGGAAGAGTTACTAGTAATGAAAATTTATATTATTTCCCACAAAAAACATTT
TCTAAAACGAATTCTTTAAAATGGAAAGGGGGACTGACACCTTATCAAAATGAGGTTTCAGAAGAGTTGTTGAAAGGTAT
TTCAAGTAAGGAAAATCTTCTTGTTCATGCTGTGACAGGGGCTGGTAAAACAGAAATGATATACCACTCTATCGCCAAAG
TAATTGATACTGGAGGGAGCGTTTGTATTGCCAGTCCTAGAATTGATGTTTGTTTAGAATTGCATAAGCGACTTTCAAAC
GATTTTAGATGTGCCATAACATTAATGCATGGAGAATCTCCTTCTTATCAGAGATCCCCTTTAACTATTGCCACAACACA
TCAATTGTTAAAATTTTATCATGCTTTTGATTTGCTAATTGTTGATGAAGTTGATGCTTTTCCATATGTCGACAACCCGA
TACTATACCATGGTGTAAAACAGGCCTTAAAGAAAAACGGAACAAGTATTTTTCTGACTGCAACTTCAACGACTGAGTTA
GAAAGAAAAGTTGCAAGAAAAGAACTAAAAAAATTACATCTAGCTAGGAGATTTCATGCCAATCCGTTAGTGATACCCGA
GATGGTTTGGGTAAGTGGTATCCAGAAAAGCTTGCAGACACAAAAACTACCTCCCAAATTATATCAGCTGATAAATAAAC
AGCGACAAACGAGATATCCTTTGTTATTATTTTTCCCCCATATTGCAGAAGGTCAGGTATTCACCGAAATGTTAAGACAA
GCCTTTCCTATGGAAAAAATTGGTTTTGTTTCAAGTAAGAGCACATCTAGGTTAAAGTTAGTGCAAGATTTTCGAGATAA
CAAATTGTCTATCCTAGTATCAACTACCATTCTAGAGAGAGGAGTAACTTTCCCTAGCGTCGACGTTTTTGTTATACAAG
CAAATCATCATTTGTTTACGAAAAGTTCCTTGGTACAAATTTCAGGAAGAGTTGGAAGAGCATTAGAAAGACCCGAAGGG
CTCCTTTACTTCCTTCATGATGGGAAAAGTAAATCGATGCACCAAGCCATAAAGGAGATTAAAAACATGAATCATATAGG
AGGATTTTAA

Domains

Predicted by InterproScan.

• DEAD/DEAH box helicase (DEAD) (93-240)

• Helicase conserved C-terminal domain (Helicase_C) (286-394)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA/cflA	Streptococcus mitis NCTC 12261	60.187	99.534	0.599
comFA/cflA	Streptococcus pneumoniae Rx1	59.719	99.534	0.594
comFA/cflA	Streptococcus pneumoniae D39	59.719	99.534	0.594
comFA/cflA	Streptococcus pneumoniae R6	59.719	99.534	0.594
comFA/cflA	Streptococcus pneumoniae TIGR4	59.719	99.534	0.594
comFA/cflA	Streptococcus mitis SK321	59.719	99.534	0.594
comFA	Lactococcus lactis subsp. cremoris KW2	50.254	91.841	0.462
comFA	Latilactobacillus sakei subsp. sakei 23K	37.037	100	0.373
comFA	Bacillus subtilis subsp. subtilis str. 168	39.312	94.872	0.373