Detailed information NTG0085461

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: BVAD3_RS16975
• Genome accession: NZ_AP024501
• Coordinates: 3495664..3496827 (-)
• Length: 387 a.a.
• NCBI ID: WP_207169021.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain AD-3
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3490664..3501827

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BVAD3_RS16945 (BVAD3_33620)	-	3490930..3491348 (-)	419	Protein_3302	TIGR03826 family flagellar region protein	-
BVAD3_RS16950	comFC	3491422..3492111 (-)	690	WP_199449054.1	ComF family protein	Machinery gene
BVAD3_RS16955 (BVAD3_33640)	-	3492117..3492401 (-)	285	WP_003151389.1	competence protein ComFB	-
BVAD3_RS16960 (BVAD3_33650)	comFA	3492459..3493844 (-)	1386	WP_029972824.1	DEAD/DEAH box helicase	Machinery gene
BVAD3_RS16965 (BVAD3_33660)	-	3493952..3494800 (-)	849	WP_003151387.1	DegV family protein	-
BVAD3_RS16970 (BVAD3_33670)	degU	3494898..3495587 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
BVAD3_RS16975 (BVAD3_33680)	degS	3495664..3496827 (-)	1164	WP_207169021.1	two-component sensor histidine kinase DegS	Regulator
BVAD3_RS16980 (BVAD3_33690)	-	3497050..3497697 (+)	648	WP_007614107.1	YigZ family protein	-
BVAD3_RS16985 (BVAD3_33700)	-	3497702..3498916 (+)	1215	WP_014419013.1	LCP family protein	-
BVAD3_RS16990 (BVAD3_33710)	-	3499006..3500082 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
BVAD3_RS16995 (BVAD3_33720)	-	3500215..3501411 (-)	1197	WP_029972825.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 44956.74 Da
• Isoelectric Point: 7.1377

>NTDB_id=85461 BVAD3_RS16975 WP_207169021.1 3495664..3496827(-) (degS) [Bacillus velezensis strain AD-3]
MNKSKMDSKVLGSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=85461 BVAD3_RS16975 WP_207169021.1 3495664..3496827(-) (degS) [Bacillus velezensis strain AD-3]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGGTTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTAGGTCTTCAGGAAATCATTGAAC
GGTCAGAATCGTTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGTTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (13-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948