Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   BVAD3_RS15040 Genome accession   NZ_AP024501
Coordinates   3083457..3085763 (-) Length   768 a.a.
NCBI ID   WP_110124325.1    Uniprot ID   -
Organism   Bacillus velezensis strain AD-3     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3078457..3090763
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BVAD3_RS15000 (BVAD3_29650) - 3078917..3079348 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  BVAD3_RS15005 (BVAD3_29660) - 3079348..3079689 (+) 342 WP_022553706.1 Na(+)/H(+) antiporter subunit C -
  BVAD3_RS15010 (BVAD3_29670) - 3079682..3081163 (+) 1482 WP_021495363.1 Na+/H+ antiporter subunit D -
  BVAD3_RS15015 (BVAD3_29680) - 3081169..3081645 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  BVAD3_RS15020 (BVAD3_29690) - 3081645..3081929 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  BVAD3_RS15025 (BVAD3_29700) mnhG 3081913..3082287 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  BVAD3_RS15030 (BVAD3_29710) - 3082327..3082710 (-) 384 WP_065180456.1 hotdog fold thioesterase -
  BVAD3_RS15035 (BVAD3_29720) comA 3082732..3083376 (-) 645 WP_014418762.1 response regulator transcription factor Regulator
  BVAD3_RS15040 (BVAD3_29730) comP 3083457..3085763 (-) 2307 WP_110124325.1 sensor histidine kinase Regulator
  BVAD3_RS15045 (BVAD3_29740) comX 3085782..3085958 (-) 177 WP_017419424.1 competence pheromone ComX -
  BVAD3_RS15050 (BVAD3_29750) - 3085973..3086869 (-) 897 WP_017419425.1 polyprenyl synthetase family protein -
  BVAD3_RS15055 (BVAD3_29760) degQ 3087000..3087140 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  BVAD3_RS15060 (BVAD3_29770) - 3087605..3087946 (+) 342 WP_014418765.1 hypothetical protein -
  BVAD3_RS15065 (BVAD3_29780) - 3087953..3089176 (-) 1224 WP_014418766.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 768 a.a.        Molecular weight: 89421.58 Da        Isoelectric Point: 8.2652

>NTDB_id=85454 BVAD3_RS15040 WP_110124325.1 3083457..3085763(-) (comP) [Bacillus velezensis strain AD-3]
MKKFIRNFSIVLLFVSLFYVVHIIYFTQNGVLVGTYVVENNNHELQVVKLSKSTYGKYMGLKEGDRIIEISGKTPTEENI
RGQYLAKAEHMKIIRDNHKIDLHNTEFISLNSSYSFFIYIIPCILFALSLLCIFYIYKVNRVKDTYSAYILIIFLLFTSI
AYLSAGGVTRGYEINRYINLFTFLNVPVLYYHFLYQYFKELKIKFSSGYVVSALYILPVINIIIEVFQNHFAFQLVTNIN
LGTFFLEMMVVYTVIIFYGLVYRKKDHFYLLKVLLISNTIAFFPFTVFYIIPEVLFGRYIYSAIVTSPFIIIIPLALVYQ
FVVNKIYDIDFLLGRIRYYGFLSIVPTIGVVWLNILFDSKGNNFNIIQITVYVFLIFLAVFYIKELLDYKFRLKRFSEKY
NYQDSIYKYTQLLKSVSALNQVFMNLKKTILDVLPVSKAYIFEINSDGDILYFDKQNSEPNWQPYKKEFVKVTSEIGKII
EVNQGFLMKIGERGANSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENILQIEELMNHLQDLKQQGSNPVWLKKLM
FTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDL
GLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGV
GCNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=85454 BVAD3_RS15040 WP_110124325.1 3083457..3085763(-) (comP) [Bacillus velezensis strain AD-3]
TTGAAAAAATTCATTAGAAATTTTTCGATTGTATTGTTATTCGTCAGTCTCTTTTACGTCGTTCATATTATATATTTTAC
TCAAAACGGAGTTTTGGTAGGAACCTATGTGGTTGAAAACAATAACCATGAATTGCAGGTTGTAAAACTCTCCAAGTCTA
CGTATGGTAAATATATGGGCTTAAAAGAGGGAGACAGGATAATTGAAATAAGCGGAAAAACACCGACAGAAGAGAATATA
AGAGGTCAATATCTAGCGAAAGCTGAACATATGAAAATTATAAGGGATAACCATAAAATAGACCTACATAATACGGAATT
TATTTCCTTGAACAGCTCTTATAGCTTTTTTATTTATATTATCCCGTGCATATTGTTTGCTTTAAGTTTGTTGTGTATTT
TTTACATTTATAAAGTTAATAGAGTAAAAGATACTTATTCAGCCTATATTTTAATTATCTTTTTATTATTTACATCTATT
GCTTATTTAAGCGCAGGTGGAGTAACTAGAGGGTATGAAATAAACAGATATATTAACCTTTTTACGTTTTTGAATGTACC
TGTACTATACTATCATTTTCTTTATCAATATTTTAAAGAATTAAAAATAAAGTTTTCATCTGGTTATGTTGTGTCTGCTT
TATATATTTTGCCGGTTATTAATATAATAATTGAGGTATTTCAAAACCATTTTGCTTTTCAACTTGTTACGAATATTAAT
TTAGGAACATTTTTTTTGGAAATGATGGTTGTTTACACGGTTATTATTTTTTATGGACTAGTCTATAGAAAAAAGGATCA
CTTTTATTTGTTGAAAGTGTTACTTATATCTAACACCATAGCTTTTTTCCCTTTTACAGTTTTTTATATTATACCTGAGG
TGTTGTTCGGACGGTATATTTATTCTGCTATAGTGACGTCACCATTTATAATTATTATTCCGTTAGCGTTAGTCTACCAA
TTCGTGGTCAATAAAATCTATGATATAGATTTTTTGTTAGGCAGAATCAGGTACTATGGTTTCCTTTCCATTGTTCCGAC
TATTGGAGTTGTTTGGCTGAATATATTATTCGACAGCAAGGGGAATAACTTTAACATTATTCAAATCACTGTATATGTAT
TTTTGATTTTTTTAGCGGTATTTTATATTAAGGAGTTATTAGACTACAAATTCCGCCTGAAACGTTTTTCAGAAAAATAT
AATTATCAAGACAGCATTTATAAATATACACAGCTTCTTAAAAGCGTATCAGCTTTAAATCAAGTGTTTATGAATTTGAA
AAAGACTATTTTGGACGTCTTGCCTGTTAGTAAAGCTTATATATTTGAAATCAATTCTGACGGAGACATTCTGTATTTTG
ATAAACAGAACAGTGAACCGAACTGGCAGCCGTATAAAAAAGAATTTGTTAAAGTCACATCAGAGATTGGCAAGATTATT
GAAGTAAATCAAGGTTTTCTGATGAAGATTGGAGAAAGAGGGGCAAACTCATACGTTCTGCTTTGTTTGTCGAGCATTAA
TACTCCAAGACTGACAAGAGATGAGATATCTTGGTTAAAGACATTGTCTTTTTATACAAGTGTTTCGATGGAAAACATAT
TGCAGATCGAAGAACTCATGAACCATTTACAAGATCTAAAGCAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTGATG
TTTACGATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAA
GCGCCAGTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGA
TGAATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGTCCTCAGCTGCTGTATGATTTG
GGTCTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCG
GTTTACGGCGGCACTGGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAACGCCATGAAGC
ATTCACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTC
GGCTGCAATCAGGAAGAAGGCGGCGGGCAGTCGATGAGCATGGGTCTTTCAGGTATTAAGGAGCGTGTCCGGGCGCTTGA
CGGACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(568-637)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

58.755

100

0.59

Multiple sequence alignment