Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG/mmsA   Type   Machinery gene
Locus tag   V6U66_RS09240 Genome accession   NZ_CP145864
Coordinates   1981063..1983081 (-) Length   672 a.a.
NCBI ID   WP_061652469.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS7     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1976063..1988081
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U66_RS09215 (V6U66_09205) - 1976866..1978068 (+) 1203 WP_284443991.1 IS110 family transposase -
  V6U66_RS09220 (V6U66_09210) - 1978330..1979088 (-) 759 WP_014632622.1 ABC transporter permease -
  V6U66_RS09225 - 1979091..1979570 (-) 480 WP_410534660.1 hypothetical protein -
  V6U66_RS09230 - 1979559..1979897 (-) 339 Protein_1768 ATP-binding cassette domain-containing protein -
  V6U66_RS09235 - 1979965..1980204 (-) 240 WP_204321263.1 Msa family membrane protein -
  V6U66_RS09240 (V6U66_09220) recG/mmsA 1981063..1983081 (-) 2019 WP_061652469.1 ATP-dependent DNA helicase RecG Machinery gene
  V6U66_RS09245 (V6U66_09225) alr 1983212..1984315 (-) 1104 WP_049527467.1 alanine racemase -
  V6U66_RS09250 (V6U66_09230) acpS 1984343..1984696 (-) 354 WP_014632616.1 holo-ACP synthase -
  V6U66_RS09255 (V6U66_09235) - 1984702..1985730 (-) 1029 WP_049527464.1 3-deoxy-7-phosphoheptulonate synthase -
  V6U66_RS09260 (V6U66_09240) - 1985815..1986846 (-) 1032 WP_410534484.1 3-deoxy-7-phosphoheptulonate synthase -

Sequence

Protein


Download         Length: 672 a.a.        Molecular weight: 75349.69 Da        Isoelectric Point: 5.8387

>NTDB_id=853652 V6U66_RS09240 WP_061652469.1 1981063..1983081(-) (recG/mmsA) [Streptococcus salivarius strain KSS7]
MIQLDSPIADLKGFGPKSAEKFTKLDLHTVGDLLLYFPFRYEDFKSKFIFELMDGEKAVITGTVVTPANVQYYGFKRNRL
SFKIKQGEAVIAISFFNQPYLVDKIEMGAEVAIFGKWDQKKSAVTGMKVLAQVEDDMQPVYHVAQGVSQAQLIKAIKAAF
DSGALNLLEESLPQVLMDKYRLMGRQEAVRAMHFPKDLAEYKQALRRTKFEELFYFQMNLQVLKAENKSETNGLAIAYDE
AKIKAKIAELPFPLTEAQQRSLSEILADMKSGAHMNRLLQGDVGSGKTVIASLAMYGAYTAGLQSALMVPTEILAEQHYQ
SLQGLFPELEVVLLTSGMKAADKKVALSKIESGEAQMIVGTHSLIQDAVTYHRLGLVITDEQHRFGVNQRRIFREKGDNP
DVLMMTATPIPRTLAITAFGEMDVSIIDQMPAGRKPIITRWVKHEQLDTVLTWIKGELEKDAQVYFISPLIEESEALDLK
NAVALHQELTDFFGDSATVALMHGRMKNDEKDQIMQDFKDKKSQILVSTTVIEVGVNVPNATVMVIMDADRFGLSQLHQL
RGRVGRGDKQSYCVLVANPKNDTGKKRMQAMCETTDGFVLAEEDLKMRGSGEIFGTRQSGIPEFQVADIVEDYNILEEAR
RVASQIVSDPNWRENPDWQVLGAHLRRQAEFD

Nucleotide


Download         Length: 2019 bp        

>NTDB_id=853652 V6U66_RS09240 WP_061652469.1 1981063..1983081(-) (recG/mmsA) [Streptococcus salivarius strain KSS7]
ATGATTCAACTAGATTCACCGATTGCGGATTTGAAAGGCTTTGGTCCTAAGTCCGCTGAAAAATTTACCAAATTAGATTT
GCACACGGTTGGGGACCTCTTGCTTTATTTTCCTTTCCGATATGAAGATTTTAAGAGTAAGTTTATCTTTGAACTGATGG
ATGGCGAAAAGGCTGTTATTACGGGAACGGTGGTGACCCCTGCCAATGTGCAATATTATGGCTTTAAACGTAATCGTCTG
AGTTTTAAAATCAAGCAAGGAGAGGCAGTGATTGCCATTAGTTTCTTCAACCAGCCTTATCTTGTGGACAAGATTGAGAT
GGGGGCAGAAGTGGCTATTTTTGGCAAATGGGACCAGAAGAAGTCGGCTGTGACTGGTATGAAAGTATTGGCTCAAGTTG
AGGACGATATGCAGCCGGTCTATCATGTGGCCCAGGGTGTTAGTCAGGCCCAGCTGATAAAGGCAATAAAGGCAGCTTTT
GATAGTGGGGCTCTTAATTTGTTGGAGGAGAGTCTCCCACAGGTGCTTATGGACAAGTATCGTCTTATGGGACGCCAAGA
GGCTGTGCGTGCTATGCATTTTCCGAAAGATTTGGCTGAATATAAGCAGGCTTTACGTAGGACCAAGTTTGAGGAGCTCT
TTTATTTCCAGATGAATTTACAGGTGCTGAAGGCTGAGAATAAGTCCGAAACCAATGGTCTAGCAATTGCTTACGATGAA
GCCAAAATTAAGGCCAAAATTGCAGAATTACCATTTCCCTTGACAGAGGCCCAACAGCGCAGTTTATCGGAAATCCTAGC
TGATATGAAATCTGGAGCTCATATGAACCGTCTTTTGCAAGGAGATGTGGGTTCAGGGAAAACAGTTATCGCTAGCCTGG
CTATGTATGGGGCTTATACGGCAGGATTGCAGTCTGCCCTCATGGTACCGACGGAAATCTTAGCAGAGCAGCATTATCAG
AGTTTGCAGGGGCTTTTTCCTGAGCTAGAGGTAGTGCTCCTAACTTCTGGGATGAAGGCGGCGGACAAAAAAGTAGCTCT
TTCCAAAATCGAATCTGGGGAGGCTCAGATGATCGTGGGGACTCACTCACTGATTCAGGATGCTGTGACTTATCACAGGC
TTGGGCTAGTAATTACTGATGAACAGCACCGTTTTGGGGTTAATCAACGTCGTATTTTCCGTGAGAAAGGTGATAATCCT
GATGTCCTTATGATGACAGCGACCCCTATTCCTAGGACCTTGGCGATCACTGCCTTTGGGGAGATGGATGTGTCAATCAT
TGACCAGATGCCAGCAGGACGTAAGCCCATTATTACCCGTTGGGTTAAACATGAGCAACTAGATACCGTACTGACTTGGA
TCAAGGGAGAGTTGGAAAAAGATGCTCAGGTCTATTTTATTTCACCTTTGATTGAAGAGTCTGAGGCTCTCGATTTGAAA
AATGCGGTGGCCCTTCATCAGGAACTCACAGATTTCTTTGGGGATTCAGCTACAGTGGCTCTGATGCACGGTCGCATGAA
AAATGATGAAAAAGACCAGATTATGCAAGATTTCAAGGATAAAAAATCTCAAATTTTAGTATCAACCACAGTTATCGAAG
TGGGGGTTAACGTGCCAAATGCTACGGTTATGGTCATTATGGATGCGGATCGTTTTGGACTTAGCCAGCTTCACCAGCTT
CGAGGCCGTGTAGGTCGTGGCGACAAGCAATCTTACTGTGTATTGGTGGCTAATCCTAAAAATGATACCGGGAAAAAACG
CATGCAAGCCATGTGTGAGACTACGGATGGTTTTGTTCTAGCAGAAGAGGACCTTAAAATGCGTGGTTCAGGAGAGATCT
TTGGGACACGTCAGTCAGGAATTCCTGAATTTCAAGTGGCTGATATTGTGGAAGACTACAATATCTTAGAAGAAGCAAGG
CGCGTGGCCAGCCAAATTGTGTCTGACCCTAACTGGCGCGAGAATCCTGATTGGCAGGTGCTTGGAGCTCATTTGAGAAG
GCAAGCTGAGTTTGACTGA

Domains

Predicted by InterProScan.

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(594-667)

DEAD/DEAH box helicase (DEAD)

(255-412)

Helicase conserved C-terminal domain (Helicase_C)

(459-567)

RecG wedge domain (RecG_wedge)

(11-158)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG/mmsA Streptococcus pneumoniae R6

71.684

99.851

0.716
  recG/mmsA Streptococcus pneumoniae R36A

71.684

99.851

0.716
  recG Bacillus subtilis subsp. subtilis str. 168

49.183

100

0.493
  recG Neisseria meningitidis strain C311

39.286

100

0.393