Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   QY487_RS14565 Genome accession   NZ_CP129459
Coordinates   2971459..2973762 (-) Length   767 a.a.
NCBI ID   WP_220181546.1    Uniprot ID   -
Organism   Bacillus velezensis strain SSF6     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 2966459..2978762
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QY487_RS14525 (QY487_14525) - 2966919..2967350 (+) 432 WP_077722765.1 Na(+)/H(+) antiporter subunit B -
  QY487_RS14530 (QY487_14530) - 2967350..2967691 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  QY487_RS14535 (QY487_14535) - 2967684..2969165 (+) 1482 WP_094247541.1 Na+/H+ antiporter subunit D -
  QY487_RS14540 (QY487_14540) - 2969171..2969647 (+) 477 WP_071392239.1 Na+/H+ antiporter subunit E -
  QY487_RS14545 (QY487_14545) - 2969647..2969931 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  QY487_RS14550 (QY487_14550) mnhG 2969915..2970289 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  QY487_RS14555 (QY487_14555) - 2970329..2970712 (-) 384 WP_003152054.1 hotdog fold thioesterase -
  QY487_RS14560 (QY487_14560) comA 2970734..2971378 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  QY487_RS14565 (QY487_14565) comP 2971459..2973762 (-) 2304 WP_220181546.1 histidine kinase Regulator
  QY487_RS14570 (QY487_14570) comX 2973774..2973938 (-) 165 WP_007613432.1 competence pheromone ComX -
  QY487_RS14575 (QY487_14575) - 2973938..2974849 (-) 912 WP_031378407.1 polyprenyl synthetase family protein -
  QY487_RS14580 (QY487_14580) degQ 2975001..2975141 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  QY487_RS14585 (QY487_14585) - 2975606..2975947 (+) 342 WP_014305721.1 hypothetical protein -
  QY487_RS14590 (QY487_14590) - 2975954..2977174 (-) 1221 WP_003152038.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 767 a.a.        Molecular weight: 88886.22 Da        Isoelectric Point: 7.3707

>NTDB_id=853476 QY487_RS14565 WP_220181546.1 2971459..2973762(-) (comP) [Bacillus velezensis strain SSF6]
MKSKYNKISVVLILLTLVYVIYLTYISTNNLLVGATISENKQGEIKIKDVEDFTMAYYAGVQKGDIVKNINGQNVKSINI
QMNKLKNVNSMVVDRNGHDIEIKLNLFNDRNFSTYLIPIIFYVVCLFCCFFCCFFIIKINEEKNLKSALVLIVFLLSASI
AYISAGGSAKGDLLSRCIMLLTLITVPLNYLLFLYHYFKELGTVLFSKKVFVLYLFPTINILFELFRSRLSFGDFIPKFN
LISFFLLFLIVAYYFIVILRRNKDTDQAHIIKVLVVINILAFSPFLCLYLIPYVFFNDYYVSSFLTASFMLLIPFSLVYQ
FMSNKIYNVDFILSKLKYYGFLALTPTIILVTTIELLREPEENFYNLKLTFLIYILMLAVFYYKEILDFRFKLKRVSERF
NYQDSIYKFTQLIRNSSSLNQVFGELKTTILEVTLTSKVYIFEVTYDGNVKAFDERDSSLIDDYQVLLNSVTVEIGKITE
FNQGFAMKVGERGDRSFVVLCLSKMNTPRLSREEISWLKTLSFYVNVSIENVMKIEELMNHLEDLKKQETNPVWLKKLMF
TIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCHIEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLG
LVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVG
CNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2304 bp        

>NTDB_id=853476 QY487_RS14565 WP_220181546.1 2971459..2973762(-) (comP) [Bacillus velezensis strain SSF6]
ATGAAGTCCAAGTACAATAAGATTTCAGTTGTCTTAATTCTGCTTACATTGGTATATGTCATTTATCTGACTTATATAAG
CACAAATAATCTTTTAGTCGGCGCCACCATTTCTGAAAATAAACAGGGCGAAATTAAAATAAAAGATGTAGAAGATTTTA
CAATGGCATATTACGCCGGAGTGCAAAAGGGAGATATAGTAAAGAATATTAACGGCCAAAATGTAAAGTCAATTAATATT
CAAATGAATAAGCTGAAAAATGTAAACTCGATGGTCGTTGATAGAAACGGTCATGATATTGAGATTAAGCTCAATTTATT
TAATGATAGGAACTTCAGTACTTACTTAATACCGATAATTTTTTATGTAGTATGTTTATTTTGCTGTTTCTTCTGCTGTT
TCTTCATCATCAAGATAAATGAAGAAAAAAACTTGAAATCTGCTTTGGTGCTAATTGTATTTCTTTTGTCTGCTTCAATC
GCATATATCAGTGCTGGAGGATCGGCAAAAGGTGATTTGCTTAGCAGATGCATTATGTTGTTAACATTAATAACTGTACC
TTTAAATTATCTTCTGTTTCTTTATCATTACTTTAAAGAATTAGGTACAGTGCTTTTCAGCAAAAAAGTTTTCGTTTTGT
ATTTATTTCCAACTATAAATATATTATTTGAATTATTTCGGTCGCGATTATCTTTTGGTGATTTTATTCCAAAATTTAAT
TTGATTTCGTTTTTTCTTCTTTTTTTGATTGTAGCATATTACTTTATTGTTATTTTGAGAAGAAACAAAGATACTGATCA
GGCACATATTATAAAGGTGCTCGTAGTTATAAATATATTGGCATTTTCGCCTTTTTTATGTCTGTATCTTATACCGTATG
TATTTTTTAATGATTATTATGTCTCTTCTTTCTTAACAGCATCATTTATGCTGCTGATACCTTTTTCACTTGTATATCAA
TTCATGTCGAATAAAATATATAACGTTGATTTTATCTTAAGTAAGTTAAAATATTACGGCTTTTTAGCGTTAACCCCAAC
TATAATTCTGGTTACGACAATTGAGTTATTACGTGAGCCGGAAGAAAATTTTTACAATCTCAAACTGACATTTTTAATTT
ATATTTTAATGTTAGCTGTTTTTTATTATAAAGAAATACTCGATTTCCGGTTTAAATTAAAAAGGGTCTCTGAAAGATTC
AATTACCAAGACAGTATTTATAAGTTTACCCAATTAATCAGAAACTCGTCTTCTTTAAATCAGGTTTTTGGAGAATTAAA
AACCACCATTCTCGAAGTCACTCTTACAAGTAAAGTGTATATATTTGAAGTTACGTATGATGGGAATGTAAAGGCATTTG
ACGAAAGAGATTCAAGTTTGATAGATGATTATCAAGTGCTTTTAAATAGTGTTACTGTTGAAATAGGAAAAATAACGGAG
TTTAATCAAGGTTTCGCAATGAAAGTAGGAGAACGGGGAGATAGATCATTCGTTGTTCTCTGTTTGTCTAAGATGAATAC
GCCCCGTTTATCACGTGAAGAAATTTCTTGGTTAAAAACATTATCTTTTTACGTTAATGTTTCAATAGAAAACGTGATGA
AAATCGAAGAACTTATGAATCATCTCGAAGATTTAAAGAAACAGGAGACAAACCCGGTCTGGCTCAAAAAGCTGATGTTT
ACGATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGATTTGATTTCTTTGAAGCG
CCAGTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAAGAGCCCTGCCACATAGAGGTGCAGGACAAGCTTCATCAGATGA
ATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTGGGT
CTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTT
TACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGCATT
CACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGC
TGCAATCAGGAAGAAGGCGGCGGACAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGACGG
ACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(567-636)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

53.886

100

0.542