Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   V6U65_RS02585 Genome accession   NZ_CP145863
Coordinates   511525..513312 (+) Length   595 a.a.
NCBI ID   WP_410532712.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS6     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 506525..518312
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U65_RS02565 (V6U65_02565) - 507122..508330 (+) 1209 WP_410532708.1 ABC transporter permease -
  V6U65_RS02570 (V6U65_02570) rplJ 508621..509124 (+) 504 WP_410532710.1 50S ribosomal protein L10 -
  V6U65_RS02575 (V6U65_02575) rplL 509199..509567 (+) 369 WP_004183006.1 50S ribosomal protein L7/L12 -
  V6U65_RS02580 (V6U65_02580) rcrP 509776..511512 (+) 1737 WP_002885969.1 ABC transporter ATP-binding protein Regulator
  V6U65_RS02585 (V6U65_02585) rcrQ 511525..513312 (+) 1788 WP_410532712.1 ABC transporter ATP-binding protein Regulator
  V6U65_RS02590 (V6U65_02590) queA 513409..514452 (-) 1044 WP_045769002.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  V6U65_RS02595 (V6U65_02595) - 514603..515304 (+) 702 WP_247922405.1 glucosamine-6-phosphate deaminase -
  V6U65_RS02600 (V6U65_02600) - 515495..516478 (+) 984 WP_037602037.1 rhodanese-related sulfurtransferase -
  V6U65_RS02605 (V6U65_02605) - 516657..516854 (+) 198 WP_002885991.1 helix-turn-helix transcriptional regulator -
  V6U65_RS02610 (V6U65_02610) - 516868..517362 (+) 495 WP_410532715.1 DUF6773 family protein -
  V6U65_RS02615 (V6U65_02615) - 517441..518211 (+) 771 WP_107372710.1 nucleoside phosphorylase -

Sequence

Protein


Download         Length: 595 a.a.        Molecular weight: 66430.59 Da        Isoelectric Point: 5.5171

>NTDB_id=853477 V6U65_RS02585 WP_410532712.1 511525..513312(+) (rcrQ) [Streptococcus salivarius strain KSS6]
MKKNKMKTSHSSSFGRLWSYLQAYRFPLYLAIFLKIVSVIMSVLEPVVIGLAITELTKNTLAIIKGVEGAHINVSYVGLV
LVVYLLRGLIYELAAYYSNYFMTNAVQATVQDMRNEMTEKINRTSVSYFDKHQFGDLLGRFTSDVETVSNALQQSFLQVV
NAVFTLALVIGTVLYLNLQLGAIVVITIPITFFGARYIMSKSQPYFKQQADALGTLNGFVQENLTGFNVLKLFGREDRSL
DDFKKITEDLQKVGFKANFISGLMMPVLNGLSDLTYLIVAVLGGLQVLAGHLTIGNMQAFVQYVWQINQPIQNLTQLAGQ
LQSAKSSLDRIFQLMDEPDEANDATEVLEGDLTGQVSFKHVDFQYVADKPLIRDFNLEVNPGEMVAIVGPTGAGKSTIIN
LLMRFYDVTAGSISVDGHDIRNLSRQDYRKQFGMVLQDAWLFEGTIKENLRFGNLDATDEEIVEAAKAANVDHFIRTLPG
GYNMEMNQESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKTLMQGRTSFVIAHRLSTIQEADKI
LVLKDGQIIEQGNHESLLADKGFYYDLYNSQFAEK

Nucleotide


Download         Length: 1788 bp        

>NTDB_id=853477 V6U65_RS02585 WP_410532712.1 511525..513312(+) (rcrQ) [Streptococcus salivarius strain KSS6]
ATGAAGAAAAATAAAATGAAAACAAGTCATTCCTCAAGTTTTGGCCGCCTTTGGTCCTACTTGCAGGCTTATCGTTTCCC
ACTTTACCTAGCTATTTTCCTGAAAATTGTTAGTGTTATCATGAGTGTCCTTGAGCCAGTGGTCATTGGTTTAGCTATTA
CCGAGTTGACTAAAAATACGCTGGCCATCATCAAAGGTGTGGAAGGCGCTCATATCAACGTCTCCTATGTTGGTTTGGTT
TTGGTTGTTTATCTCTTGCGTGGTCTTATTTATGAGTTGGCTGCCTACTATTCCAACTATTTCATGACCAATGCCGTGCA
AGCGACGGTTCAAGATATGCGAAATGAGATGACCGAGAAAATCAATCGTACCTCAGTGTCATACTTTGATAAGCACCAGT
TTGGGGATCTCTTAGGCCGCTTTACCAGTGACGTCGAGACAGTATCAAATGCCTTGCAGCAGTCATTCTTGCAGGTTGTT
AATGCCGTCTTTACTCTAGCCTTGGTTATTGGAACAGTGCTTTACCTTAATCTTCAATTGGGAGCTATAGTTGTCATCAC
TATTCCGATTACTTTCTTTGGTGCCCGCTACATCATGAGTAAGTCTCAGCCCTACTTTAAACAACAAGCTGATGCTCTAG
GTACTCTTAATGGTTTTGTTCAGGAAAATCTGACTGGCTTCAATGTACTTAAGCTTTTTGGGCGTGAGGATAGATCCTTG
GATGATTTTAAAAAAATCACGGAAGATCTTCAGAAGGTGGGCTTTAAGGCCAATTTCATTTCAGGACTTATGATGCCGGT
TCTTAACGGTTTATCTGACTTGACCTATCTCATTGTTGCTGTTCTAGGTGGTTTGCAAGTCTTGGCTGGTCACTTGACGA
TTGGTAATATGCAGGCCTTTGTTCAGTATGTTTGGCAGATTAACCAACCCATTCAGAACTTGACTCAGTTGGCTGGACAA
TTGCAGAGTGCTAAATCTTCCTTGGACCGTATTTTCCAACTCATGGATGAACCAGACGAGGCTAATGATGCTACTGAGGT
GCTTGAAGGAGATTTGACTGGGCAAGTTAGCTTTAAGCATGTGGATTTCCAGTATGTGGCTGATAAACCTTTGATTCGTG
ACTTTAATCTTGAGGTTAATCCTGGAGAAATGGTGGCCATTGTCGGTCCTACCGGTGCCGGAAAATCAACCATTATCAAC
CTCCTCATGCGTTTCTATGATGTGACTGCTGGTTCTATTTCGGTTGACGGTCACGATATCCGTAACCTGTCACGTCAGGA
TTATCGTAAACAGTTTGGTATGGTGCTTCAGGATGCTTGGCTCTTTGAAGGAACTATCAAGGAAAATCTTCGCTTTGGTA
ATCTTGATGCGACTGACGAAGAAATTGTTGAAGCCGCTAAGGCAGCCAATGTGGACCACTTTATCCGTACACTACCTGGT
GGTTACAACATGGAAATGAACCAGGAATCAAGTAACATCTCACTAGGACAAAAGCAACTTTTGACCATTGCGCGTGCGCT
TTTGGCTGATCCTAAAATCTTGATTTTGGACGAGGCGACCTCATCGGTTGATACCCGTCTGGAACTCTTGATTCAAAAAG
CTATGAAGACCCTTATGCAAGGTCGAACAAGCTTTGTCATTGCCCACCGCCTGTCAACTATTCAAGAGGCAGACAAGATT
TTGGTCCTTAAAGATGGTCAAATCATCGAACAAGGAAATCATGAATCCCTCCTTGCAGATAAAGGCTTCTATTACGACTT
GTATAATAGCCAGTTTGCAGAGAAATAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(29-310)

ABC transporter (ABC_tran)

(373-521)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

42.23

99.496

0.42