Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   V6U65_RS02390 Genome accession   NZ_CP145863
Coordinates   468119..468925 (+) Length   268 a.a.
NCBI ID   WP_410532683.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS6     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 463119..473925
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U65_RS02365 (V6U65_02365) tpiA 463312..464070 (+) 759 WP_002890214.1 triose-phosphate isomerase -
  V6U65_RS02370 (V6U65_02370) recP/tkt 464334..466319 (+) 1986 WP_410532677.1 transketolase Machinery gene
  V6U65_RS02380 (V6U65_02380) tmk 466609..467238 (+) 630 WP_410532679.1 dTMP kinase -
  V6U65_RS02385 (V6U65_02385) - 467247..468122 (+) 876 WP_410532681.1 DNA polymerase III subunit delta' -
  V6U65_RS02390 (V6U65_02390) yaaT 468119..468925 (+) 807 WP_410532683.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  V6U65_RS02395 (V6U65_02395) yabA 468912..469232 (+) 321 WP_002887582.1 DNA replication initiation control protein YabA -
  V6U65_RS02400 (V6U65_02400) rsmI 469235..470101 (+) 867 WP_002886001.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  V6U65_RS02405 (V6U65_02405) - 470238..471473 (+) 1236 WP_410533082.1 ammonium transporter -
  V6U65_RS02410 (V6U65_02410) - 471484..471825 (+) 342 WP_002886165.1 P-II family nitrogen regulator -
  V6U65_RS02415 (V6U65_02415) - 471916..472572 (+) 657 WP_410532685.1 glucosaminidase domain-containing protein -
  V6U65_RS02420 (V6U65_02420) - 472590..473411 (+) 822 WP_410532687.1 Cof-type HAD-IIB family hydrolase -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29755.18 Da        Isoelectric Point: 4.6503

>NTDB_id=853475 V6U65_RS02390 WP_410532683.1 468119..468925(+) (yaaT) [Streptococcus salivarius strain KSS6]
MTEVIGIKFEETGAVEYVVPDKNYAKDDFVVVLEKKDKRLAQVVMENTDFPEVSLPADLNRVEGLAGEKDFARYEENLLK
AEKSLGVVADLIAQNQLDMKVVDIVFPLNNSYVLISFVAEKRVDFRQLLKDLASYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGDEIETKDGMGQVVAIDVI
AGTIKVVFEKGRAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=853475 V6U65_RS02390 WP_410532683.1 468119..468925(+) (yaaT) [Streptococcus salivarius strain KSS6]
ATGACAGAAGTCATTGGAATAAAATTTGAAGAAACTGGAGCAGTAGAATATGTTGTTCCTGATAAAAATTACGCCAAAGA
TGACTTTGTAGTCGTTTTGGAGAAAAAGGATAAGCGCCTAGCCCAGGTTGTCATGGAAAACACAGATTTTCCTGAGGTTA
GTCTGCCTGCGGATTTGAATCGGGTTGAAGGATTGGCAGGAGAGAAAGATTTTGCTAGATATGAGGAAAATCTTTTGAAG
GCTGAAAAGAGTCTGGGAGTAGTGGCTGATTTAATTGCTCAAAATCAGCTAGATATGAAGGTGGTTGATATTGTCTTTCC
GCTAAATAACTCTTATGTGTTAATCAGTTTTGTAGCTGAAAAACGGGTAGATTTTCGTCAGTTGCTCAAAGATCTGGCTT
CTTACTTTAAGACACGCATTGAGTTGCGTCAAATTTCAAGTCGTGAGGAATCAAAAATCTATGGTGGCTTAGGACCTTGT
GGACGGGCACTTTGTTGTTCTAGTTTTTTGGGTGAATTCCCACCAGTATCGATTAAGATGGCTAAAAATCAGAGTTTATC
TTTGAATTCTGGTAAGATGAATGGGGTCTGTGGTCGACTTATGTGTTGTCTCAGTTATGAAGATGACTTTTACCGAGATA
GCAAGGCTAGTTATCCTGATTTGGGTGATGAAATTGAAACCAAGGATGGCATGGGTCAGGTTGTTGCCATTGATGTGATT
GCAGGGACCATTAAGGTTGTATTTGAAAAAGGGCGTGCGCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

42.697

99.627

0.425