Detailed information NTG0852925

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: QYE82_RS06115
• Genome accession: NZ_CP129374
• Coordinates: 1268943..1269917 (+)
• Length: 324 a.a.
• NCBI ID: WP_301560328.1
• Uniprot ID: -
• Organism: Staphylococcus epidermidis strain CSMH-411EB
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1263943..1274917

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QYE82_RS06080	rpmG	1264425..1264574 (+)	150	WP_001830957.1	50S ribosomal protein L33	-
QYE82_RS06085	-	1264755..1265306 (+)	552	WP_002446539.1	5-formyltetrahydrofolate cyclo-ligase	-
QYE82_RS06090	-	1265307..1266767 (+)	1461	WP_301560327.1	rhomboid family intramembrane serine protease	-
QYE82_RS06095	-	1266751..1266951 (+)	201	WP_002446537.1	YqgQ family protein	-
QYE82_RS06100	-	1266951..1267937 (+)	987	WP_020362277.1	ROK family glucokinase	-
QYE82_RS06105	-	1267937..1268263 (+)	327	WP_001831234.1	MTH1187 family thiamine-binding protein	-
QYE82_RS06110	-	1268263..1268886 (+)	624	WP_002446535.1	MBL fold metallo-hydrolase	-
QYE82_RS06115	comGA	1268943..1269917 (+)	975	WP_301560328.1	competence type IV pilus ATPase ComGA	Machinery gene
QYE82_RS06120	comGB	1269889..1270956 (+)	1068	WP_002496884.1	competence type IV pilus assembly protein ComGB	Machinery gene
QYE82_RS06125	comGC	1270974..1271291 (+)	318	WP_002446532.1	competence type IV pilus major pilin ComGC	Machinery gene
QYE82_RS06130	comGD	1271281..1271718 (+)	438	WP_301560329.1	competence type IV pilus minor pilin ComGD	-
QYE82_RS06135	-	1271705..1271998 (+)	294	WP_020367648.1	hypothetical protein	-
QYE82_RS06140	comGF	1271922..1272413 (+)	492	WP_301560330.1	competence type IV pilus minor pilin ComGF	-
QYE82_RS06145	-	1272578..1273090 (+)	513	WP_002496881.1	shikimate kinase	-
QYE82_RS06150	gcvT	1273308..1274399 (+)	1092	WP_002501008.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37260.35 Da
• Isoelectric Point: 9.0015

>NTDB_id=852925 QYE82_RS06115 WP_301560328.1 1268943..1269917(+) (comGA) [Staphylococcus epidermidis strain CSMH-411EB]
MKILFEQIINHAIKQEASDIHFIPCEEHTIIKLRIKDELTIYDTLSFPIYKKLLIYMKFQSGLDVSTQHRAQSGRYSYKM
KRLYYLRISTLPLSLGNESCVIRIVPQYFQTKRESYEFKDFKHFMKKKQGLLLFSGPTGSGKSTLMYQMVLYAHQNLNLN
VISVEDPVEQILNGITQISVNEKAGINYESSFKAILRCDPNVILIGEIRDSTVAKYVIQASLSGHLVLSTMHANDCKGAL
LRLLEMGISVQELCQAINLISNQRLITTTTNTRQLVSELMFQSQINYFFEHNHSLPKNFTKLSTHLNKMSKEGVICEEVV
DKYI

Nucleotide

• Length: 975 bp

>NTDB_id=852925 QYE82_RS06115 WP_301560328.1 1268943..1269917(+) (comGA) [Staphylococcus epidermidis strain CSMH-411EB]
TTGAAAATTTTATTTGAACAGATTATCAATCATGCAATTAAGCAAGAAGCAAGTGACATACACTTTATACCATGTGAGGA
ACACACTATAATTAAGCTAAGAATTAAAGATGAGCTCACAATATATGATACACTTTCATTTCCAATTTATAAAAAATTAC
TTATATACATGAAGTTTCAATCTGGGTTAGATGTATCAACACAGCATAGGGCACAAAGTGGTAGATATAGTTATAAGATG
AAGCGTTTATATTATTTAAGAATCTCTACATTACCGTTATCATTAGGCAATGAAAGTTGTGTAATTCGTATAGTACCTCA
ATACTTCCAAACTAAACGCGAATCATATGAATTTAAAGATTTTAAACACTTCATGAAAAAGAAACAAGGTCTGCTTTTGT
TTAGTGGACCAACTGGCTCTGGCAAAAGTACTTTAATGTACCAAATGGTCCTTTATGCACATCAAAATTTGAATTTAAAT
GTAATATCAGTTGAAGATCCAGTAGAACAAATACTCAATGGAATCACACAAATATCAGTTAATGAAAAGGCAGGTATAAA
TTATGAAAGCTCTTTCAAAGCCATTTTAAGGTGTGATCCAAACGTAATTTTAATTGGTGAAATCAGAGATTCTACCGTAG
CTAAATACGTGATTCAAGCCAGTTTAAGTGGACATTTAGTTTTGTCGACAATGCACGCGAATGATTGCAAGGGAGCATTA
TTACGATTATTAGAAATGGGTATTTCTGTCCAAGAGTTGTGCCAGGCAATCAATTTAATTTCTAATCAAAGATTAATCAC
TACTACTACAAATACTCGTCAACTAGTATCGGAATTAATGTTTCAAAGCCAAATCAATTATTTTTTTGAACATAATCATT
CTTTACCTAAAAATTTCACAAAATTATCTACACATTTAAACAAAATGTCTAAAGAAGGTGTTATATGTGAAGAAGTTGTC
GATAAATACATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	69.753	100	0.698
comGA	Staphylococcus aureus N315	69.753	100	0.698