Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   V6T01_RS02510 Genome accession   NZ_CP145856
Coordinates   486261..487067 (+) Length   268 a.a.
NCBI ID   WP_410541186.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS1     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 481261..492067
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6T01_RS02485 (V6T01_02475) tpiA 481435..482193 (+) 759 WP_002890214.1 triose-phosphate isomerase -
  V6T01_RS02490 (V6T01_02480) recP/tkt 482455..484440 (+) 1986 WP_410541187.1 transketolase Machinery gene
  V6T01_RS02500 (V6T01_02490) tmk 484751..485380 (+) 630 WP_410532679.1 dTMP kinase -
  V6T01_RS02505 (V6T01_02495) - 485389..486264 (+) 876 WP_410532681.1 DNA polymerase III subunit delta' -
  V6T01_RS02510 (V6T01_02500) yaaT 486261..487067 (+) 807 WP_410541186.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  V6T01_RS02515 (V6T01_02505) yabA 487054..487374 (+) 321 WP_002887582.1 DNA replication initiation control protein YabA -
  V6T01_RS02520 (V6T01_02510) rsmI 487377..488243 (+) 867 WP_410541185.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  V6T01_RS02525 (V6T01_02515) - 488380..489615 (+) 1236 WP_410541184.1 ammonium transporter -
  V6T01_RS02530 (V6T01_02520) - 489626..489967 (+) 342 WP_002886165.1 P-II family nitrogen regulator -
  V6T01_RS02535 (V6T01_02525) - 490058..490714 (+) 657 WP_410541183.1 glucosaminidase domain-containing protein -
  V6T01_RS02540 (V6T01_02530) - 490731..491309 (+) 579 WP_073687478.1 HD domain-containing protein -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29716.10 Da        Isoelectric Point: 4.6503

>NTDB_id=852925 V6T01_RS02510 WP_410541186.1 486261..487067(+) (yaaT) [Streptococcus salivarius strain KSS1]
MTEVIGIKFEETGAVEYVVPDKNYAKDDFVVVLEKKDKRLAQVVMENTDFPEVSLPADLNRVEGLAGEKDFARYEENLLK
AEKSMGVVADLIAQNQLDMKVVDIVFPLNSSYVLISFVAEKRVDFRQLLKDLASYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGDEIETKDGTGQVVAIDVI
AGTIKVVFEKGRAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=852925 V6T01_RS02510 WP_410541186.1 486261..487067(+) (yaaT) [Streptococcus salivarius strain KSS1]
ATGACAGAAGTCATTGGAATAAAATTTGAAGAAACTGGAGCAGTAGAATATGTTGTTCCTGATAAAAATTACGCCAAAGA
TGACTTTGTAGTCGTTTTGGAGAAAAAGGATAAGCGCCTAGCCCAGGTTGTCATGGAAAACACAGATTTTCCTGAGGTTA
GTCTGCCTGCGGATTTGAATCGGGTTGAAGGATTGGCAGGAGAGAAAGATTTTGCTAGATATGAGGAAAATCTTTTGAAG
GCTGAAAAGAGTATGGGAGTAGTGGCTGATTTAATTGCTCAAAATCAGCTAGATATGAAGGTGGTTGATATTGTCTTTCC
ACTAAATAGCTCTTATGTGTTAATCAGTTTTGTAGCTGAAAAACGGGTAGATTTTCGTCAGTTGCTCAAAGATCTGGCTT
CTTACTTTAAGACACGTATTGAGTTGCGTCAAATTTCAAGTCGTGAGGAATCAAAAATCTATGGTGGCTTAGGACCTTGT
GGCCGGGCACTTTGTTGTTCTAGTTTTTTGGGTGAATTCCCACCAGTATCGATTAAGATGGCTAAAAATCAGAGTTTATC
TTTGAATTCTGGTAAGATGAATGGGGTCTGTGGTCGACTTATGTGTTGTCTCAGTTATGAAGATGACTTTTACCGAGATA
GCAAGGCGAGTTATCCTGACTTGGGTGATGAAATTGAAACCAAGGATGGCACGGGTCAGGTCGTTGCCATTGATGTGATT
GCAGGGACCATTAAGGTTGTATTTGAAAAAGGGCGTGCGCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

42.966

98.134

0.422