Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   V6T01_RS02775 Genome accession   NZ_CP145856
Coordinates   546320..548107 (+) Length   595 a.a.
NCBI ID   WP_410541167.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 541320..553107
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6T01_RS02755 (V6T01_02740) - 541898..543451 (+) 1554 WP_410541168.1 BCCT family transporter -
  V6T01_RS02760 (V6T01_02745) - 543461..543586 (+) 126 Protein_496 LysR family transcriptional regulator -
  V6T01_RS02765 (V6T01_02750) - 543623..544354 (+) 732 WP_310591108.1 LysR family transcriptional regulator substrate-binding protein -
  V6T01_RS02770 (V6T01_02755) rcrP 544571..546307 (+) 1737 WP_037599682.1 ABC transporter ATP-binding protein Regulator
  V6T01_RS02775 (V6T01_02760) rcrQ 546320..548107 (+) 1788 WP_410541167.1 ABC transporter ATP-binding protein Regulator
  V6T01_RS02780 (V6T01_02765) queA 548204..549247 (-) 1044 WP_107372702.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  V6T01_RS02785 (V6T01_02770) - 549399..550100 (+) 702 WP_060971296.1 glucosamine-6-phosphate deaminase -
  V6T01_RS02790 (V6T01_02775) - 550290..551273 (+) 984 WP_410541166.1 rhodanese-related sulfurtransferase -
  V6T01_RS02795 (V6T01_02780) - 551452..551649 (+) 198 WP_014621323.1 helix-turn-helix transcriptional regulator -
  V6T01_RS02800 (V6T01_02785) - 551663..552157 (+) 495 WP_410541165.1 DUF6773 family protein -
  V6T01_RS02805 (V6T01_02790) - 552236..553006 (+) 771 WP_410541164.1 nucleoside phosphorylase -

Sequence

Protein


Download         Length: 595 a.a.        Molecular weight: 66476.66 Da        Isoelectric Point: 5.2508

>NTDB_id=852927 V6T01_RS02775 WP_410541167.1 546320..548107(+) (rcrQ) [Streptococcus salivarius strain KSS1]
MKKNKMKISHSSSFGRLWSYLQAYRFPLYLAIFLKIVSVIMSVLEPVVIGLAITELTKNTLAIIKGVEGAHINVSYVGLV
LVVYLLRGLIYELAAYYSNYFMTNAVQATVQDMRNEMTEKINRTSVSYFDKHQFGDLLGRFTSDVETVSNALQQSFLQVV
NAVFTLALVIGTVLYLNLQLGAIVVITIPITFFGARYIMSKSQPYFKQQADALGTLNGFVQENLTGFNVLKLFGREDRSL
DDFKEITEDLQKVGFKANFISGLMMPVLNGLSDLTYLIVAVLGGLQVLAGRLTIGNMQAFVQYVWQINQPIQNLTQLAGQ
LQSAKSSLDRIFQLMDEPDEANDATEVLEGDLTGQVSFKHVDFQYVADKPLIRDFNLEVNPGEMVAIVGPTGAGKSTIIN
LLMRFYDVTAGSISVDGHDIRNLSRQDYRKQFGMVLQDAWLFEGTIKENLRFGNLEATDEEIVEAAKAANVDHFIRTLPG
GYNMEMNQESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKTLMQGRTSFVIAHRLSTIQEADKI
LVLKDGQIIEQGNHESLLADKGFYYDLYNSQFAEK

Nucleotide


Download         Length: 1788 bp        

>NTDB_id=852927 V6T01_RS02775 WP_410541167.1 546320..548107(+) (rcrQ) [Streptococcus salivarius strain KSS1]
ATGAAGAAAAATAAAATGAAAATAAGTCATTCCTCAAGTTTTGGCCGCCTTTGGTCCTACTTGCAGGCTTATCGTTTCCC
ACTTTACCTAGCTATTTTCCTGAAAATTGTTAGTGTTATCATGAGTGTCCTTGAGCCAGTGGTCATTGGTTTAGCTATTA
CCGAGTTGACTAAAAATACGCTGGCCATCATCAAAGGTGTGGAAGGCGCTCATATCAACGTATCATATGTTGGTTTAGTT
TTGGTTGTTTATCTCTTGCGTGGTCTTATTTATGAGTTGGCTGCCTACTATTCCAACTATTTTATGACCAATGCTGTGCA
AGCAACGGTTCAAGATATGCGAAATGAGATGACTGAGAAAATCAATCGTACCTCAGTGTCATACTTTGATAAGCACCAGT
TTGGGGATCTCTTGGGACGCTTTACCAGTGACGTCGAGACAGTATCTAATGCCTTGCAGCAGTCATTCTTACAGGTTGTT
AATGCCGTCTTTACTCTAGCCTTGGTTATTGGAACAGTGCTTTACCTTAATCTTCAATTGGGAGCTATAGTTGTCATCAC
TATTCCGATTACTTTCTTTGGAGCCCGCTATATCATGAGTAAGTCTCAGCCCTACTTTAAACAACAAGCTGATGCCCTAG
GTACTCTTAATGGTTTTGTTCAGGAAAATCTGACTGGCTTCAATGTGCTTAAGCTATTTGGCCGTGAGGATAGATCCTTG
GACGATTTTAAAGAAATCACGGAAGACCTTCAGAAGGTAGGCTTTAAGGCTAATTTCATTTCAGGACTCATGATGCCGGT
TCTTAACGGTTTATCTGACTTGACCTATCTAATTGTCGCTGTTCTAGGTGGTTTGCAAGTTTTGGCTGGTCGCCTAACGA
TTGGTAATATGCAGGCCTTTGTTCAGTACGTTTGGCAGATTAATCAACCTATTCAGAACTTGACTCAGTTGGCTGGACAA
TTGCAAAGTGCTAAATCTTCTTTAGACCGTATTTTCCAACTGATGGATGAACCAGACGAGGCTAATGATGCTACTGAAGT
ACTAGAAGGAGATTTGACTGGCCAAGTTAGCTTTAAGCATGTGGACTTCCAGTATGTGGCTGATAAACCTTTGATTCGTG
ACTTTAATCTTGAGGTTAATCCTGGTGAAATGGTGGCCATTGTCGGTCCTACCGGTGCTGGGAAATCAACCATTATCAAC
CTTCTCATGCGTTTCTATGATGTGACTGCTGGTTCTATTTCAGTTGATGGTCACGATATCCGTAACCTGTCTCGTCAGGA
TTATCGTAAACAGTTTGGTATGGTGCTTCAGGATGCTTGGCTCTTTGAAGGAACTATCAAGGAAAATCTTCGCTTTGGTA
ATCTTGAGGCAACTGACGAAGAAATTGTTGAAGCTGCTAAGGCGGCCAATGTGGATCACTTTATCCGTACATTACCTGGC
GGTTACAACATGGAAATGAACCAGGAATCAAGTAACATCTCACTAGGACAAAAGCAACTTTTGACCATTGCGCGTGCGCT
TTTGGCTGATCCTAAAATCTTGATTTTGGACGAGGCGACCTCATCGGTTGATACCCGTCTGGAACTCCTGATTCAAAAAG
CCATGAAGACCCTTATGCAAGGTAGAACAAGCTTTGTCATTGCCCACCGTCTATCGACCATTCAAGAAGCAGACAAAATT
TTGGTACTTAAAGATGGTCAAATCATCGAACAAGGGAACCATGAATCCCTCCTTGCAGATAAAGGCTTCTATTACGACTT
GTATAATAGCCAGTTTGCGGAGAAATAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(29-310)

ABC transporter (ABC_tran)

(373-521)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

42.23

99.496

0.42