Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   V6T01_RS02770 Genome accession   NZ_CP145856
Coordinates   544571..546307 (+) Length   578 a.a.
NCBI ID   WP_037599682.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 539571..551307
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6T01_RS02740 (V6T01_02725) - 539765..539887 (+) 123 WP_002269975.1 hypothetical protein -
  V6T01_RS02745 (V6T01_02730) - 539944..541020 (+) 1077 WP_410541685.1 CHAP domain-containing protein -
  V6T01_RS02750 (V6T01_02735) - 541078..541670 (+) 593 Protein_494 type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein -
  V6T01_RS02755 (V6T01_02740) - 541898..543451 (+) 1554 WP_410541168.1 BCCT family transporter -
  V6T01_RS02760 (V6T01_02745) - 543461..543586 (+) 126 Protein_496 LysR family transcriptional regulator -
  V6T01_RS02765 (V6T01_02750) - 543623..544354 (+) 732 WP_310591108.1 LysR family transcriptional regulator substrate-binding protein -
  V6T01_RS02770 (V6T01_02755) rcrP 544571..546307 (+) 1737 WP_037599682.1 ABC transporter ATP-binding protein Regulator
  V6T01_RS02775 (V6T01_02760) rcrQ 546320..548107 (+) 1788 WP_410541167.1 ABC transporter ATP-binding protein Regulator
  V6T01_RS02780 (V6T01_02765) queA 548204..549247 (-) 1044 WP_107372702.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  V6T01_RS02785 (V6T01_02770) - 549399..550100 (+) 702 WP_060971296.1 glucosamine-6-phosphate deaminase -
  V6T01_RS02790 (V6T01_02775) - 550290..551273 (+) 984 WP_410541166.1 rhodanese-related sulfurtransferase -

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 64786.64 Da        Isoelectric Point: 5.3001

>NTDB_id=852926 V6T01_RS02770 WP_037599682.1 544571..546307(+) (rcrP) [Streptococcus salivarius strain KSS1]
MAYIWSYLRRYPKWLAMNFTAAILFVIANLGLPTVLARMIDEGINRGDVDKLYAYAWVMFGVVLTGIVGRILLSYAVGKL
TTTMVQVMRNDIYAKLQEYSHHEYEQIGVSSLVTRITSDAFVLMQFADQVLKLGVITPLMMVSSVFLILTTSPSLAWIVA
ISLPFLAVVVWYVAVKTRPLSEKQQATLDKINQYARENLTGLRVIRAFAREDFQEKKFASENAVYADNSNKLFKLTGLTE
PLFVQIIIAMIVAIVWFALEPLGSGSLAIGDLVAFIEYSFHALLSFLFLANLFTMYPRTAVSSERLQEIMDMPISINPNE
DGVTETETKGYLEFDNVTFAYPGETESPVLHNISFKAKPGETIAFIGSTGSGKSSLVQLIPRFYDVTLGRILVDGVDVRD
YNLKALRRKIGFIPQKALLFTGTIGENIRYGKENASHEELNQATDVAQAKEFIESKEERYDSHLAEGGSNLSGGQKQRLS
IARAVVKRPDLYIFDDSFSALDYKTDATLRRRLKEVTQDATVLIVAQRVGTIMDADQIIVLDEGEIVGRGRHEELMESND
IYREIANSQLNQKSLTED

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=852926 V6T01_RS02770 WP_037599682.1 544571..546307(+) (rcrP) [Streptococcus salivarius strain KSS1]
ATGGCTTATATTTGGTCTTATCTCAGACGTTATCCTAAGTGGCTAGCAATGAATTTTACGGCAGCCATTTTATTTGTTAT
TGCTAACTTGGGTTTGCCGACGGTTCTTGCCAGAATGATTGATGAGGGAATAAACCGTGGTGATGTTGATAAGCTTTACG
CTTACGCTTGGGTCATGTTTGGTGTAGTTTTGACTGGGATTGTTGGTCGTATACTTCTGTCCTATGCAGTTGGTAAGTTG
ACCACTACTATGGTGCAAGTCATGCGTAATGACATTTATGCTAAGCTTCAGGAGTATTCTCACCACGAGTATGAGCAGAT
AGGGGTATCCTCTTTGGTGACTCGTATTACATCAGATGCTTTTGTGCTTATGCAGTTTGCGGATCAGGTTCTTAAGCTAG
GGGTTATCACTCCTTTGATGATGGTTTCCAGTGTCTTTTTGATTTTGACGACAAGTCCATCTTTGGCTTGGATTGTGGCA
ATCTCCTTGCCTTTCCTAGCCGTAGTAGTCTGGTATGTGGCGGTAAAAACGCGTCCGCTTTCTGAAAAACAACAGGCAAC
TCTCGACAAGATTAACCAGTATGCTCGTGAAAATCTGACTGGACTTCGTGTCATCCGAGCTTTCGCTAGAGAAGATTTTC
AAGAGAAGAAGTTCGCTTCTGAAAATGCTGTCTATGCGGATAATTCAAATAAACTTTTCAAATTGACTGGTTTGACCGAG
CCACTTTTTGTGCAAATCATCATCGCTATGATTGTGGCAATTGTTTGGTTTGCCCTTGAGCCATTAGGTTCTGGAAGTTT
GGCTATCGGTGACTTGGTTGCTTTTATTGAGTACAGCTTCCATGCACTATTGTCCTTCCTTTTCCTAGCCAATCTCTTTA
CCATGTATCCTCGTACAGCGGTATCTAGTGAACGTCTGCAGGAAATTATGGACATGCCGATTTCTATCAATCCAAATGAA
GATGGCGTGACAGAAACCGAGACTAAGGGATATTTGGAATTTGACAATGTGACCTTTGCCTATCCTGGTGAAACTGAAAG
TCCTGTCTTACACAATATTTCTTTCAAGGCAAAACCTGGTGAAACCATTGCCTTTATTGGGTCTACGGGTTCAGGAAAAT
CATCACTTGTACAGTTAATTCCACGCTTTTATGATGTAACACTTGGACGCATTCTTGTTGATGGTGTAGATGTCCGTGAT
TACAATCTTAAGGCTCTTCGTCGTAAGATTGGCTTTATTCCACAAAAAGCTCTACTCTTTACTGGAACTATCGGTGAAAA
TATCCGTTATGGTAAGGAAAATGCCAGTCATGAAGAATTGAATCAAGCTACTGATGTGGCTCAAGCCAAGGAATTTATCG
AAAGTAAGGAAGAACGCTATGATTCTCACTTGGCTGAGGGTGGCAGCAACCTTTCTGGTGGACAGAAGCAGCGTTTGTCA
ATTGCACGTGCGGTGGTTAAACGTCCTGATCTTTATATCTTTGATGATTCCTTCTCTGCCTTGGACTACAAGACAGATGC
GACCTTGCGCCGCCGTCTGAAAGAAGTGACTCAGGATGCGACAGTCTTGATTGTGGCGCAACGTGTGGGAACTATCATGG
ATGCTGATCAAATCATTGTTTTGGATGAAGGTGAAATCGTTGGTCGTGGCCGTCATGAAGAGCTTATGGAAAGCAATGAC
ATTTACCGTGAAATTGCTAATTCACAATTGAATCAAAAGAGTCTTACGGAAGACTAG

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(350-497)

ABC transporter transmembrane region (ABC_membrane)

(17-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.662

92.042

0.365