Detailed information NTG0852892

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: QYE83_RS06015
• Genome accession: NZ_CP129372
• Coordinates: 1274958..1275932 (+)
• Length: 324 a.a.
• NCBI ID: WP_002446534.1
• Uniprot ID: -
• Organism: Staphylococcus epidermidis strain CCSH-141
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1269958..1280932

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QYE83_RS05980	rpmG	1270440..1270589 (+)	150	WP_001830957.1	50S ribosomal protein L33	-
QYE83_RS05985	-	1270770..1271321 (+)	552	WP_002446539.1	5-formyltetrahydrofolate cyclo-ligase	-
QYE83_RS05990	-	1271322..1272782 (+)	1461	WP_002446538.1	rhomboid family intramembrane serine protease	-
QYE83_RS05995	-	1272766..1272966 (+)	201	WP_002446537.1	YqgQ family protein	-
QYE83_RS06000	-	1272966..1273952 (+)	987	WP_002446536.1	ROK family glucokinase	-
QYE83_RS06005	-	1273952..1274278 (+)	327	WP_001831234.1	MTH1187 family thiamine-binding protein	-
QYE83_RS06010	-	1274278..1274901 (+)	624	WP_150871737.1	MBL fold metallo-hydrolase	-
QYE83_RS06015	comGA	1274958..1275932 (+)	975	WP_002446534.1	competence type IV pilus ATPase ComGA	Machinery gene
QYE83_RS06020	comGB	1275904..1276971 (+)	1068	WP_002446533.1	competence type IV pilus assembly protein ComGB	Machinery gene
QYE83_RS06025	comGC	1276989..1277306 (+)	318	WP_002446532.1	competence type IV pilus major pilin ComGC	Machinery gene
QYE83_RS06030	comGD	1277296..1277733 (+)	438	WP_002446531.1	competence type IV pilus minor pilin ComGD	-
QYE83_RS06035	-	1277720..1278013 (+)	294	WP_002446530.1	hypothetical protein	-
QYE83_RS06040	comGF	1277937..1278428 (+)	492	WP_002446529.1	competence type IV pilus minor pilin ComGF	-
QYE83_RS06045	-	1278593..1279105 (+)	513	WP_002446528.1	shikimate kinase	-
QYE83_RS06050	gcvT	1279323..1280414 (+)	1092	WP_301555490.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37261.33 Da
• Isoelectric Point: 8.8257

>NTDB_id=852892 QYE83_RS06015 WP_002446534.1 1274958..1275932(+) (comGA) [Staphylococcus epidermidis strain CCSH-141]
MKILFEQIINHAIKQEASDIHFIPCEEHTIIKLRIKDELTIYDTLSFPIYKKLLIYMKFQSGLDVSTQHRAQSGRYSYKM
KRLYYLRISTLPLSLGNESCVIRIVPQYFQTKRESYEFKDFKHFMKKKQGLLLFSGPTGSGKSTLMYQMVLYAHQNLNLN
VISVEDPVEQILNGITQISVNEKAGINYESSFKAILRCDPDVILIGEIRDSTVAKYVIQASLSGHLVLSTMHANDCKGAL
LRLLEMGISVQELCQAINLISNQRLITTTTNTRQLVSELMFQSQINYFFEHNHSLPKNFTKLSTHLNKMSKEGVICEEVV
DKYI

Nucleotide

• Length: 975 bp

>NTDB_id=852892 QYE83_RS06015 WP_002446534.1 1274958..1275932(+) (comGA) [Staphylococcus epidermidis strain CCSH-141]
TTGAAAATTTTATTTGAACAGATTATCAATCATGCAATTAAGCAAGAAGCAAGTGACATACACTTTATACCATGTGAGGA
ACACACTATAATTAAGCTAAGAATTAAAGATGAGCTCACAATATATGATACACTTTCATTTCCAATTTATAAAAAATTAC
TTATATACATGAAGTTTCAATCTGGGTTAGATGTATCAACACAGCATAGGGCACAAAGTGGTAGATATAGTTATAAGATG
AAGCGTTTATATTATTTAAGAATCTCTACATTACCGTTATCATTAGGCAATGAAAGTTGTGTAATTCGTATAGTACCTCA
ATACTTCCAAACTAAACGAGAATCATATGAATTTAAAGATTTTAAACATTTCATGAAAAAGAAACAAGGTCTACTTTTGT
TTAGTGGGCCAACTGGCTCTGGCAAAAGTACTTTAATGTACCAAATGGTCCTTTATGCACATCAAAATTTGAATTTAAAT
GTAATATCAGTTGAAGATCCAGTAGAACAAATACTCAATGGAATCACACAAATATCAGTTAATGAAAAGGCAGGTATAAA
TTATGAAAGCTCTTTCAAAGCCATTTTAAGGTGTGATCCGGACGTAATTTTAATTGGTGAAATCAGAGATTCTACCGTAG
CTAAATACGTGATTCAAGCCAGTTTAAGTGGACATTTAGTTTTGTCGACAATGCACGCGAATGATTGCAAGGGAGCATTA
TTACGATTATTAGAAATGGGTATTTCTGTCCAAGAGTTGTGCCAGGCAATCAATTTAATTTCTAATCAAAGATTAATCAC
TACTACTACAAATACTCGTCAACTAGTATCGGAATTAATGTTTCAAAGCCAAATCAATTATTTTTTTGAACATAATCATT
CTTTACCTAAAAATTTCACAAAATTATCTACACATTTAAACAAAATGTCTAAAGAAGGTGTTATATGTGAAGAAGTTGTC
GATAAATACATTTAA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (7-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	70.062	100	0.701
comGA	Staphylococcus aureus N315	70.062	100	0.701