Detailed information NTG0852515

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: QYM22_RS21455
• Genome accession: NZ_CP129342
• Coordinates: 4077973..4079130 (-)
• Length: 385 a.a.
• NCBI ID: WP_046130089.1
• Uniprot ID: A0AAE2EQS2
• Organism: Bacillus glycinifermentans strain SRCM12603
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 4072973..4084130

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QYM22_RS21425 (QYM22_21425)	-	4073199..4073618 (-)	420	WP_046130084.1	TIGR03826 family flagellar region protein	-
QYM22_RS21430 (QYM22_21430)	-	4073676..4074364 (-)	689	Protein_4194	phosphoribosyltransferase family protein	-
QYM22_RS21435 (QYM22_21435)	-	4074352..4074654 (-)	303	WP_046130085.1	competence protein ComFB	-
QYM22_RS21440 (QYM22_21440)	comFA	4074710..4076119 (-)	1410	WP_046130086.1	DEAD/DEAH box helicase	Machinery gene
QYM22_RS21445 (QYM22_21445)	-	4076238..4077080 (-)	843	WP_065894697.1	DegV family protein	-
QYM22_RS21450 (QYM22_21450)	degU	4077201..4077890 (-)	690	WP_046130088.1	two-component system response regulator DegU	Regulator
QYM22_RS21455 (QYM22_21455)	degS	4077973..4079130 (-)	1158	WP_046130089.1	histidine kinase	Regulator
QYM22_RS21460 (QYM22_21460)	-	4079350..4079988 (+)	639	WP_046130090.1	YigZ family protein	-
QYM22_RS21465 (QYM22_21465)	-	4080003..4081094 (+)	1092	WP_046130091.1	LCP family protein	-
QYM22_RS21470 (QYM22_21470)	-	4081146..4082210 (-)	1065	WP_046130092.1	MraY family glycosyltransferase	-
QYM22_RS21475 (QYM22_21475)	-	4082353..4083531 (-)	1179	WP_046130093.1	glycosyltransferase	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44660.38 Da
• Isoelectric Point: 7.0402

>NTDB_id=852515 QYM22_RS21455 WP_046130089.1 4077973..4079130(-) (degS) [Bacillus glycinifermentans strain SRCM12603]
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSETEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFHCIGESEDRRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEAQKKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFILIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=852515 QYM22_RS21455 WP_046130089.1 4077973..4079130(-) (degS) [Bacillus glycinifermentans strain SRCM12603]
GTGAGCGTTTCCAAAATGGACTCCAAAGTCTTGGATTCAATAATAATGAAGATGTTAAAAACCGTTGACGGGAGCAAGGA
TGAAGTATTTCAAATCGGCGAACAGTCCCGTCAGCAATATGAAGGCTTGGTAGAAGAGCTGAAGCAGATCAAGCAGCAGG
TCAACGAAGTCATCGATCTCGGAGACAGGTTGGAGGTGCATGCCCGGCATGCGAGGAACCGTCTGTCAGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAACGGAAATTCGCGAAGCTTATGAAAAGGCGCACAAACTTCAAGTTGAGCTTACGATGAT
TCAGCAGCGCGAAAAGCAGCTGAGGGAGAAGCGCGACGATCTGGAAAGGCGTCTCCTCGGTCTTCAGGAAATCATTGAGC
GTTCCGAAGGTCTTGTCAGCCAGATAACTGTCGTTTTAAACTATTTAAACCAAGATCTTCGCCAGGTCGGCGTTTTATTG
GAAGACGCGCAGGCAAAACAGGATTTCGGCTTGCGGATCATCGAAGCGCAAGAGGAAGAAAGAAAAAGGGTCTCGCGCGA
AATTCATGACGGTCCGGCGCAAATGCTGGCAAACGTGATGATGAGATCTGAATTGATCGAACGGATTTTCAGAGACAAGG
GGACCGAAGAAGGCTTTCAGGAAATTAAAAACCTCCGGCAAAACGTTCGCAATGCCCTTTATGAAGTCAGACGGATTATT
TATGACTTAAGGCCGATGGCTTTAGACGATTTGGGCCTGATTCCGACGCTCAGAAAATACTTGAACACGATCGAAGATTA
TCATGGCAAAGCGAAAATCCATTTTCATTGCATCGGGGAATCGGAAGACAGGCGGATTGCACCGCGATTTGAAGTGGCGC
TTTTCCGGCTGGCTCAGGAAGCTGTCACGAATGCCCTAAAACATTCCGAATCAACCGAAATTCATGTTAAAGTAGAAGTG
ACGAAAGATTTTGTTACGCTGATTATAAAAGATAACGGAAACGGCTTTGATTTAAAAGAAGCGCAAAAGAAGAAAAACAA
ATCGTTCGGTCTGCTTGGAATGAAGGAAAGAGTCGATTTGCTTGAAGGTACGATGACGATCGACTCGAAAATAGGTCTCG
GGACATTTATTTTAATTAAAGTTCCGCTGTCATTGTAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (292-384)

• Histidine kinase (HisKA_3) (180-248)

• Sensor protein DegS (DegS) (12-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	89.351	100	0.894