Detailed information
Bioinformatically predicted
Overview
| Name | degS | Type | Regulator |
| Locus tag | QYC34_RS20280 | Genome accession | NZ_CP129338 |
| Coordinates | 3756299..3757456 (-) | Length | 385 a.a. |
| NCBI ID | WP_003227983.1 | Uniprot ID | A0A199WDV9 |
| Organism | Bacillus subtilis strain SRCM126725 | ||
| Function | phosphorylation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3751299..3762456
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QYC34_RS20250 (QYC34_20250) | yvyF | 3751552..3751971 (-) | 420 | WP_024572694.1 | TIGR03826 family flagellar region protein | - |
| QYC34_RS20255 (QYC34_20255) | comFC | 3752044..3752766 (-) | 723 | WP_014481051.1 | comF operon protein ComFC | Machinery gene |
| QYC34_RS20260 (QYC34_20260) | comFB | 3752730..3753026 (-) | 297 | WP_003227989.1 | late competence protein ComFB | - |
| QYC34_RS20265 (QYC34_20265) | comFA | 3753086..3754477 (-) | 1392 | WP_014481052.1 | ATP-dependent helicase ComFA | Machinery gene |
| QYC34_RS20270 (QYC34_20270) | fakBA | 3754584..3755429 (-) | 846 | WP_014481053.1 | DegV family protein | - |
| QYC34_RS20275 (QYC34_20275) | degU | 3755527..3756216 (-) | 690 | WP_014481054.1 | two-component system response regulator DegU | Regulator |
| QYC34_RS20280 (QYC34_20280) | degS | 3756299..3757456 (-) | 1158 | WP_003227983.1 | two-component sensor histidine kinase DegS | Regulator |
| QYC34_RS20285 (QYC34_20285) | - | 3757673..3758326 (+) | 654 | WP_046160906.1 | YigZ family protein | - |
| QYC34_RS20290 (QYC34_20290) | - | 3758326..3759318 (+) | 993 | WP_014481056.1 | LCP family protein | - |
| QYC34_RS20295 (QYC34_20295) | - | 3759916..3760380 (+) | 465 | WP_228394534.1 | hypothetical protein | - |
| QYC34_RS20300 (QYC34_20300) | - | 3760429..3760884 (+) | 456 | WP_014481057.1 | hypothetical protein | - |
| QYC34_RS20305 (QYC34_20305) | - | 3760935..3761387 (+) | 453 | WP_014481058.1 | hypothetical protein | - |
| QYC34_RS20310 (QYC34_20310) | - | 3761463..3762242 (+) | 780 | WP_014481059.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 385 a.a. Molecular weight: 44957.76 Da Isoelectric Point: 6.2957
>NTDB_id=852371 QYC34_RS20280 WP_003227983.1 3756299..3757456(-) (degS) [Bacillus subtilis strain SRCM126725]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL
Nucleotide
Download Length: 1158 bp
>NTDB_id=852371 QYC34_RS20280 WP_003227983.1 3756299..3757456(-) (degS) [Bacillus subtilis strain SRCM126725]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAAGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATCGAGCTTGGCGATAAACTTGAAGTGCAAACCCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGGATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTACGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAAGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATCGAGCTTGGCGATAAACTTGAAGTGCAAACCCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGGATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTACGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| degS | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |