Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QYC34_RS03565 Genome accession   NZ_CP129338
Coordinates   680029..680979 (+) Length   316 a.a.
NCBI ID   WP_015382768.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM126725     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 675029..685979
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QYC34_RS03540 (QYC34_03540) rapC 676489..677637 (+) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator
  QYC34_RS03545 (QYC34_03545) phrC 677621..677743 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  QYC34_RS03550 (QYC34_03550) yczM 677843..677932 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  QYC34_RS03555 (QYC34_03555) yczN 678014..678127 (-) 114 WP_032678937.1 YjcZ family sporulation protein -
  QYC34_RS03560 (QYC34_03560) thrD 678280..679644 (-) 1365 WP_032726529.1 aspartate kinase -
  QYC34_RS03565 (QYC34_03565) ceuB 680029..680979 (+) 951 WP_015382768.1 petrobactin ABC transporter permease YclN Machinery gene
  QYC34_RS03570 (QYC34_03570) yclO 680972..681919 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  QYC34_RS03575 (QYC34_03575) yclP 681913..682671 (+) 759 WP_046160055.1 petrobactin ABC transporter ATP-binding protein YclP -
  QYC34_RS03580 (QYC34_03580) yclQ 682693..683646 (+) 954 WP_046160056.1 petrobactin ABC transporter substrate-binding protein YclQ -
  QYC34_RS03585 (QYC34_03585) cdaE 683693..685111 (-) 1419 WP_046160057.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34885.30 Da        Isoelectric Point: 9.9364

>NTDB_id=852313 QYC34_RS03565 WP_015382768.1 680029..680979(+) (ceuB) [Bacillus subtilis strain SRCM126725]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLIAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=852313 QYC34_RS03565 WP_015382768.1 680029..680979(+) (ceuB) [Bacillus subtilis strain SRCM126725]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACAACGGCG
GGCACGATGGATTGGGCTCGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCGGCCAGTCCTTTAATCAAAATGCT
GATCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.848

100

0.528