Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   QWI19_RS16195 Genome accession   NZ_CP129123
Coordinates   3100720..3101619 (-) Length   299 a.a.
NCBI ID   WP_015251332.1    Uniprot ID   -
Organism   Bacillus subtilis strain 6D1     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3095720..3106619
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QWI19_RS16160 mrpE 3095958..3096434 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  QWI19_RS16165 mrpF 3096434..3096718 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  QWI19_RS16170 mnhG 3096702..3097076 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  QWI19_RS16175 yuxO 3097117..3097497 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  QWI19_RS16180 comA 3097516..3098160 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  QWI19_RS16185 comP 3098241..3100550 (-) 2310 WP_015251333.1 two-component system sensor histidine kinase ComP Regulator
  QWI19_RS16190 comX 3100565..3100732 (-) 168 WP_003242801.1 competence pheromone ComX Regulator
  QWI19_RS16195 comQ 3100720..3101619 (-) 900 WP_015251332.1 ComX modifying isoprenyl transferase ComQ Regulator
  QWI19_RS16200 degQ 3101804..3101944 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  QWI19_RS16205 - 3102166..3102291 (+) 126 WP_003228793.1 hypothetical protein -
  QWI19_RS16210 - 3102405..3102773 (+) 369 WP_014477834.1 hypothetical protein -
  QWI19_RS16215 pdeH 3102749..3103978 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  QWI19_RS16220 pncB 3104115..3105587 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  QWI19_RS16225 pncA 3105603..3106154 (-) 552 WP_014477836.1 cysteine hydrolase family protein -

Sequence


Protein


Download         Length: 299 a.a.        Molecular weight: 34188.12 Da        Isoelectric Point: 4.9041

>NTDB_id=851231 QWI19_RS16195 WP_015251332.1 3100720..3101619(-) (comQ) [Bacillus subtilis strain 6D1]
MKEIVEQNIFNEDLSQLLYSFIDSKETFSFAESTILHYVVFGGENLDVATRLGAGIEILILSSDIMDDLEDEDNHHALWM
KINRSESLNAALSLYTVGLTSIYSLNNNPLIFKYVLKYVNEAMQGQHDDITNKSKTEDESLEVIRLKCGSLIALANVAGV
LLATGVYNETVERYSYYKGIIAQISGDYYVLLSGNRSDIEKNKHTLIYLYLKRLFNDASEDLLYLISHKDLYYKSLLDKE
KFQEKLIKAGVTQYISVLLEIYKQKCISAIEQLNLDKEKKELIKECLLSYTKGDTRCKT

Nucleotide


Download         Length: 900 bp        

>NTDB_id=851231 QWI19_RS16195 WP_015251332.1 3100720..3101619(-) (comQ) [Bacillus subtilis strain 6D1]
ATGAAGGAGATTGTGGAGCAAAACATATTTAACGAGGATTTGTCACAACTTCTTTACTCATTTATTGATTCTAAAGAAAC
ATTCTCCTTTGCTGAATCCACAATCTTACATTATGTTGTTTTTGGAGGGGAGAATTTAGATGTTGCAACAAGGCTTGGCG
CGGGAATAGAAATTCTTATTCTTTCATCAGATATTATGGATGATCTTGAAGATGAAGATAATCACCATGCATTATGGATG
AAAATTAATCGCTCGGAGTCGTTAAATGCAGCACTTTCCTTGTATACAGTAGGATTAACGAGTATTTATTCATTAAATAA
CAATCCTCTAATTTTTAAATATGTTTTAAAATACGTAAACGAGGCCATGCAAGGTCAACATGACGATATCACTAATAAAT
CTAAAACAGAAGATGAAAGTTTAGAAGTAATTAGATTAAAATGTGGAAGTCTGATTGCACTAGCAAATGTAGCAGGTGTT
TTATTGGCTACAGGAGTATATAATGAAACAGTTGAAAGATATTCCTACTATAAAGGGATTATTGCTCAAATTTCTGGAGA
TTATTATGTTCTTTTATCCGGAAATCGCAGTGATATTGAAAAAAACAAACATACACTGATTTACTTATATCTTAAGCGCC
TTTTTAATGATGCTTCGGAAGATTTATTATACTTAATTTCACATAAAGACTTATATTATAAATCGTTACTTGATAAAGAG
AAATTCCAAGAAAAATTAATTAAAGCGGGAGTTACTCAATACATTTCGGTATTATTGGAAATATATAAACAGAAATGTAT
TTCTGCTATAGAACAATTAAATTTAGATAAAGAAAAAAAAGAGCTAATAAAGGAATGCTTATTAAGTTATACAAAGGGGG
ATACAAGATGCAAGACCTAA

Domains


Predicted by InterproScan.

(44-218)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

99.666

100

0.997