Detailed information NTG0850872

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: QU610_RS04340
• Genome accession: NZ_CP129105
• Coordinates: 916678..917478 (+)
• Length: 266 a.a.
• NCBI ID: WP_137296608.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain HP45k
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 911678..922478

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QU610_RS04305 (QU610_04305)	pseH	912173..912715 (+)	543	WP_137296613.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
QU610_RS04310 (QU610_04310)	-	912648..913586 (-)	939	WP_137296612.1	tetraacyldisaccharide 4'-kinase	-
QU610_RS04315 (QU610_04315)	-	913583..914365 (-)	783	WP_137296611.1	NAD+ synthase	-
QU610_RS04325 (QU610_04325)	ilvC	914614..915606 (+)	993	WP_137296610.1	ketol-acid reductoisomerase	-
QU610_RS04330 (QU610_04330)	minD	915630..916436 (+)	807	WP_137296609.1	septum site-determining protein MinD	-
QU610_RS04335 (QU610_04335)	minE	916433..916666 (+)	234	WP_000051425.1	cell division topological specificity factor MinE	-
QU610_RS04340 (QU610_04340)	dprA	916678..917478 (+)	801	WP_137296608.1	DNA-processing protein DprA	Machinery gene
QU610_RS04345 (QU610_04345)	dprB	917475..917879 (+)	405	WP_137296607.1	Holliday junction resolvase RuvX	Machinery gene
QU610_RS04350 (QU610_04350)	-	917976..918170 (+)	195	WP_249351080.1	tetratricopeptide repeat protein	-
QU610_RS04355 (QU610_04355)	-	918335..918769 (+)	435	WP_290136966.1	hypothetical protein	-
QU610_RS04360 (QU610_04360)	-	918772..919176 (+)	405	WP_249351078.1	hypothetical protein	-
QU610_RS04365 (QU610_04365)	-	919182..919859 (+)	678	Protein_842	DUF1887 family CARF protein	-
QU610_RS04370 (QU610_04370)	-	920195..920315 (+)	121	Protein_843	DNA adenine methylase	-
QU610_RS04375 (QU610_04375)	-	920520..921344 (+)	825	WP_137296606.1	mechanosensitive ion channel family protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29877.86 Da
• Isoelectric Point: 8.5826

>NTDB_id=850872 QU610_RS04340 WP_137296608.1 916678..917478(+) (dprA) [Helicobacter pylori strain HP45k]
MKSHFQYSALENIPKAFDILKDPPKKLYCVGDIKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=850872 QU610_RS04340 WP_137296608.1 916678..917478(+) (dprA) [Helicobacter pylori strain HP45k]
ATGAAAAGCCACTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCTACGAA
CAATCATAAAGTGATCCAAGAAATCGCGCAAAACGGCCTGATTTTAAGCGAATATGAAAAAGACTTCATGCCCATTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGTAGCGCGAGATTAGCCCAAAAATACCAAAAACCCTTATTTGTTTTACCCCAGCGCTTAAATGAAAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGCGCCAAAAACCCTAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGTATCAATCATCTCGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	97.368	100	0.974
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414