Detailed information NTG0084946

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: JUH08_RS08780
• Genome accession: NZ_AP024354
• Coordinates: 1816233..1818458 (+)
• Length: 741 a.a.
• NCBI ID: WP_203791978.1
• Uniprot ID: A0AA37CGX9
• Organism: Aquipseudomonas alcaligenes strain KAM426
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1811233..1823458

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JUH08_RS08750 (KAM426_17380)	-	1811426..1811728 (-)	303	WP_021700495.1	hypothetical protein	-
JUH08_RS08755 (KAM426_17390)	-	1811725..1812297 (-)	573	WP_021700494.1	PilZ domain-containing protein	-
JUH08_RS08760 (KAM426_17400)	-	1812396..1813646 (+)	1251	WP_203791974.1	lipoprotein-releasing ABC transporter permease subunit	-
JUH08_RS08765 (KAM426_17410)	lolD	1813639..1814322 (+)	684	WP_203791975.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
JUH08_RS08770 (KAM426_17420)	-	1814324..1815568 (+)	1245	WP_203791976.1	lipoprotein-releasing ABC transporter permease subunit	-
JUH08_RS08775 (KAM426_17430)	-	1815608..1816135 (-)	528	WP_203791977.1	DUF2062 domain-containing protein	-
JUH08_RS08780 (KAM426_17440)	comA	1816233..1818458 (+)	2226	WP_203791978.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
JUH08_RS08785 (KAM426_17450)	-	1818531..1819202 (+)	672	WP_203791979.1	MotA/TolQ/ExbB proton channel family protein	-
JUH08_RS08790 (KAM426_17460)	-	1819199..1819627 (+)	429	WP_203791980.1	biopolymer transporter ExbD	-
JUH08_RS08795 (KAM426_17470)	lpxK	1819624..1820628 (+)	1005	WP_203791981.1	tetraacyldisaccharide 4'-kinase	-
JUH08_RS08800 (KAM426_17480)	-	1820668..1820853 (+)	186	WP_021700485.1	Trm112 family protein	-
JUH08_RS08805 (KAM426_17490)	kdsB	1820854..1821618 (+)	765	WP_203791982.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
JUH08_RS08810 (KAM426_17500)	-	1821618..1822082 (+)	465	WP_142137360.1	low molecular weight protein-tyrosine-phosphatase	-
JUH08_RS08815 (KAM426_17510)	murB	1822079..1823098 (+)	1020	WP_203791983.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80004.18 Da
• Isoelectric Point: 9.4600

>NTDB_id=84946 JUH08_RS08780 WP_203791978.1 1816233..1818458(+) (comA) [Aquipseudomonas alcaligenes strain KAM426]
MRKGMFALAAGLASLPLLPALPPTWLLLALLPVALMLLPWRSYPVSLLLIGLVWACFGAQSALDDRLAAELDGRTLWLEG
RVSGLPEVAAGVVRFQLEDATARAHRLPARMRLAWYDGPPLLAGERWRLAVKLKRPRGLVNPQGFDYEAWLLAQRIGASG
TVKAGERLRPATGPAAWRDALRQRLLAVEAFGRAGGLAALVLGDDSGLSRADWQVLQDTGTVHLLVISGQHVALLAALLY
GLVAGLARLGLWPRALPWLPWACALAFAGALGYGLLAGFEVPVRRACVMVALVLLWRLRFRHLGLWWPLLLAFVLVLLVE
PLASLQAGFWLSFGAVAVLAWVFGGRLGAWSWWHVWWRAQWTLALGLLPLFFALGLPLSLSGPLANLLAVPWVSLLVVPL
ALLGTLLLPVPWLGEALLWLAGGLLELLFQTLGWIAAMLPAWLPTALPLWAWLLGSLGVLLCLLPAGVPLRGLGLVMLLA
VLLPPRERIPAGHAEVWQLDVGQGLAVLVRTREHALLYDAGPRFGDFDLGERVVLPSLRQLGVGRLDLLLLSHADSDHAG
GAGALVRGMAVGRVLSGEAAALPEELQASACVDGASWEWDGVRFTTWRWGGAQAGNQSSCLLKVAAAGEALLLTGDIDEA
AERALMAADRDLRADWLQVPHHGSRSSSSGAFLDAVAPRGALLSRGWHNPFGHPHPRVVARYEARDIALHDSAELGAIRL
VLGAGEGIAAWRERPRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=84946 JUH08_RS08780 WP_203791978.1 1816233..1818458(+) (comA) [Aquipseudomonas alcaligenes strain KAM426]
ATGCGCAAGGGAATGTTCGCGCTGGCGGCGGGGCTGGCCAGCCTGCCGCTGTTGCCGGCGCTGCCGCCGACCTGGCTGCT
GCTGGCATTACTGCCAGTGGCGCTGATGCTGCTGCCCTGGCGCAGCTATCCCGTCTCCCTGTTGCTCATCGGCCTGGTCT
GGGCCTGCTTTGGCGCGCAGTCGGCCCTGGATGATCGTCTTGCCGCGGAGCTCGATGGCCGCACCCTGTGGCTGGAGGGG
CGGGTCAGTGGGCTGCCGGAAGTCGCTGCGGGCGTGGTGCGCTTCCAGCTGGAAGACGCGACCGCACGGGCGCACCGCCT
GCCCGCGCGCATGCGCCTGGCCTGGTACGACGGACCGCCGCTGCTGGCCGGCGAGCGCTGGCGCCTGGCGGTCAAGCTCA
AGCGTCCGCGGGGCCTGGTCAACCCACAGGGTTTCGATTACGAGGCCTGGCTGCTGGCGCAGCGCATCGGCGCCAGCGGC
ACGGTCAAGGCCGGCGAGCGCCTGCGCCCGGCCACGGGGCCGGCCGCCTGGCGCGATGCGCTGCGCCAGCGCCTGCTCGC
CGTCGAGGCGTTCGGCCGCGCCGGCGGCCTGGCGGCTCTGGTGCTGGGCGACGACTCCGGGCTCAGTCGGGCCGACTGGC
AGGTGCTGCAGGACACCGGCACGGTGCACCTGCTGGTGATCTCCGGCCAGCACGTGGCGCTGCTGGCGGCGCTGCTCTAC
GGCCTGGTTGCCGGGTTGGCGCGGCTCGGGCTGTGGCCACGGGCGCTGCCCTGGTTGCCCTGGGCCTGCGCCCTGGCCTT
CGCCGGGGCGCTGGGCTATGGCCTGCTGGCCGGCTTCGAGGTGCCGGTGCGCCGTGCCTGCGTGATGGTCGCCCTGGTGC
TGCTGTGGCGCCTGCGCTTCCGCCACCTGGGCCTGTGGTGGCCGCTGCTGCTGGCCTTCGTGCTGGTGCTGCTGGTCGAG
CCGCTGGCCAGTCTGCAGGCCGGCTTCTGGTTGTCCTTCGGCGCCGTGGCGGTGCTCGCCTGGGTGTTCGGTGGGCGGCT
CGGTGCCTGGTCCTGGTGGCATGTTTGGTGGCGTGCGCAGTGGACCCTGGCGCTGGGCCTGCTGCCGCTGTTCTTCGCCC
TCGGCTTGCCACTCAGTCTCAGCGGCCCCCTGGCCAACCTGCTGGCGGTGCCCTGGGTCAGCCTGCTGGTGGTGCCGCTG
GCACTGCTCGGAACCCTGTTGCTGCCCGTACCCTGGCTGGGCGAGGCATTGCTGTGGCTGGCCGGTGGCCTGCTGGAGCT
GCTGTTCCAGACACTGGGCTGGATAGCCGCAATGCTGCCGGCCTGGTTGCCCACCGCCTTGCCGCTCTGGGCCTGGCTGC
TCGGCAGCCTGGGGGTACTGCTCTGCCTGTTGCCGGCCGGTGTGCCGCTGCGTGGCCTCGGCCTGGTCATGCTGCTGGCA
GTGTTGCTGCCGCCGCGCGAGCGCATTCCTGCGGGGCACGCGGAAGTCTGGCAACTGGACGTTGGCCAGGGCCTGGCCGT
GCTGGTGCGTACCCGCGAGCACGCGCTGCTGTATGACGCCGGTCCGCGCTTCGGCGACTTCGACCTGGGCGAGCGGGTGG
TGCTGCCCTCGCTGCGCCAGCTGGGTGTCGGTCGCCTCGACCTGTTGCTGCTCAGCCACGCCGACAGCGATCATGCCGGC
GGTGCCGGGGCGCTGGTGCGAGGCATGGCGGTGGGGCGGGTGCTGAGCGGCGAGGCAGCGGCTCTGCCGGAGGAGTTGCA
GGCTAGCGCCTGTGTCGATGGCGCCAGCTGGGAGTGGGACGGTGTGCGTTTCACCACCTGGCGCTGGGGCGGGGCGCAGG
CGGGTAACCAGTCCTCCTGCCTGCTCAAGGTGGCGGCCGCAGGCGAGGCGCTGCTGCTGACCGGCGATATCGACGAGGCG
GCGGAAAGGGCGCTCATGGCCGCCGACCGGGATCTACGCGCGGACTGGCTGCAGGTGCCGCACCATGGTAGCCGCAGCTC
CTCCAGCGGCGCTTTCCTCGACGCCGTGGCGCCGCGCGGCGCGCTGCTGTCGCGCGGCTGGCACAACCCCTTCGGTCATC
CGCATCCGCGCGTCGTGGCGCGCTACGAGGCGCGAGATATCGCCCTGCATGACAGTGCCGAGCTCGGCGCCATCCGGCTA
GTGCTGGGCGCAGGCGAGGGCATTGCCGCCTGGCGCGAGCGCCCGCGTTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (20-167)

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-684)

• Competence protein (Competence) (200-464)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	67.273	96.491	0.649
comA	Ralstonia pseudosolanacearum GMI1000	36.647	100	0.413