Detailed information NTG0848882

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: QTN52_RS18005
• Genome accession: NZ_CP128551
• Coordinates: 3595832..3596995 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain SRCM123441
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3590832..3601995

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QTN52_RS17975 (QTN52_17975)	-	3591097..3591516 (-)	420	WP_014419009.1	TIGR03826 family flagellar region protein	-
QTN52_RS17980 (QTN52_17980)	comFC	3591590..3592279 (-)	690	WP_217425079.1	phosphoribosyltransferase family protein	Machinery gene
QTN52_RS17985 (QTN52_17985)	-	3592285..3592569 (-)	285	WP_017418816.1	competence protein ComFB	-
QTN52_RS17990 (QTN52_17990)	comFA	3592627..3594012 (-)	1386	WP_134986672.1	DEAD/DEAH box helicase	Machinery gene
QTN52_RS17995 (QTN52_17995)	-	3594120..3594968 (-)	849	WP_015418336.1	DegV family protein	-
QTN52_RS18000 (QTN52_18000)	degU	3595066..3595755 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
QTN52_RS18005 (QTN52_18005)	degS	3595832..3596995 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
QTN52_RS18010 (QTN52_18010)	-	3597218..3597865 (+)	648	WP_007614107.1	YigZ family protein	-
QTN52_RS18015 (QTN52_18015)	-	3597870..3599063 (+)	1194	WP_017418814.1	LCP family protein	-
QTN52_RS18020 (QTN52_18020)	-	3599163..3600239 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
QTN52_RS18025 (QTN52_18025)	-	3600371..3601567 (-)	1197	WP_017418813.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=848882 QTN52_RS18005 WP_007407484.1 3595832..3596995(-) (degS) [Bacillus velezensis strain SRCM123441]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=848882 QTN52_RS18005 WP_007407484.1 3595832..3596995(-) (degS) [Bacillus velezensis strain SRCM123441]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGAAGAGATGATTTAGAACGCCGGCTTTTAGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCAGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGCCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGATAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951