Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   QTN52_RS15900 Genome accession   NZ_CP128551
Coordinates   3187670..3188608 (-) Length   312 a.a.
NCBI ID   WP_271243340.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM123441     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3182670..3193608
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QTN52_RS15865 (QTN52_15865) - 3182877..3183353 (+) 477 WP_017419419.1 Na+/H+ antiporter subunit E -
  QTN52_RS15870 (QTN52_15870) - 3183353..3183637 (+) 285 WP_017419420.1 Na(+)/H(+) antiporter subunit F1 -
  QTN52_RS15875 (QTN52_15875) mnhG 3183621..3183995 (+) 375 WP_017419421.1 monovalent cation/H(+) antiporter subunit G -
  QTN52_RS15880 (QTN52_15880) - 3184035..3184418 (-) 384 WP_017419422.1 hotdog fold thioesterase -
  QTN52_RS15885 (QTN52_15885) comA 3184440..3185084 (-) 645 WP_014418762.1 response regulator transcription factor Regulator
  QTN52_RS15890 (QTN52_15890) comP 3185165..3187474 (-) 2310 WP_087634938.1 histidine kinase Regulator
  QTN52_RS15895 (QTN52_15895) - 3187494..3187670 (-) 177 WP_087634937.1 competence pheromone ComX -
  QTN52_RS15900 (QTN52_15900) comQ 3187670..3188608 (-) 939 WP_271243340.1 class 1 isoprenoid biosynthesis enzyme Regulator
  QTN52_RS15905 (QTN52_15905) degQ 3188739..3188879 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  QTN52_RS15910 (QTN52_15910) - 3189344..3189685 (+) 342 WP_014418765.1 hypothetical protein -
  QTN52_RS15915 (QTN52_15915) - 3189692..3190915 (-) 1224 WP_014418766.1 EAL and HDOD domain-containing protein -
  QTN52_RS15920 (QTN52_15920) - 3191045..3192511 (-) 1467 WP_014418767.1 nicotinate phosphoribosyltransferase -
  QTN52_RS15925 (QTN52_15925) - 3192529..3193080 (-) 552 WP_025853916.1 isochorismatase family cysteine hydrolase -
  QTN52_RS15930 (QTN52_15930) - 3193177..3193575 (-) 399 WP_087634936.1 DUF1694 domain-containing protein -

Sequence


Protein


Download         Length: 312 a.a.        Molecular weight: 35878.23 Da        Isoelectric Point: 5.6823

>NTDB_id=848875 QTN52_RS15900 WP_271243340.1 3187670..3188608(-) (comQ) [Bacillus velezensis strain SRCM123441]
MKTIIEQMCLDADQIKNRMKSIIEQNIFNEHLLQLLLGFVESRKYLTFAESALFHYDVFGGKDFKTAEKLAAGIEILTLS
ADIIDDLEDEDNNQALWMKIDRSEALSAAFSLYTAGLQGINSINMNPLILTYILKYTQDAMQGQHDDIINKPEKEDESLE
VIRLKCGSLFALSNVAGTMLATGKFSETVETYSYYKGMFEQIYSDYLALFSSKRSDILKDKHTLINLYLKRLFNEPSEKL
VRMFSHRETHLKFISDKNIFIQTLTDAGVTQYVSVLHQLYKQKCENAIERLNLENSKIDKLKKYVVNRGIEV

Nucleotide


Download         Length: 939 bp        

>NTDB_id=848875 QTN52_RS15900 WP_271243340.1 3187670..3188608(-) (comQ) [Bacillus velezensis strain SRCM123441]
GTGAAGACAATTATTGAGCAAATGTGTTTAGATGCCGACCAAATCAAGAATAGAATGAAGAGTATAATAGAGCAGAACAT
ATTCAATGAACATTTACTGCAGCTTCTTCTTGGGTTTGTTGAATCCAGAAAATATTTAACCTTTGCTGAATCTGCTTTAT
TCCATTATGACGTTTTTGGCGGAAAAGATTTTAAGACTGCTGAGAAACTTGCGGCGGGAATTGAAATTCTTACGCTATCC
GCTGATATTATTGATGATCTTGAAGATGAGGATAACAATCAGGCTCTTTGGATGAAGATAGACCGTTCAGAAGCTTTAAG
CGCAGCTTTTTCATTATACACAGCAGGGCTGCAAGGGATTAATTCAATTAACATGAATCCCTTAATTCTTACTTACATAC
TGAAATATACACAAGACGCTATGCAAGGGCAGCACGATGATATAATTAATAAGCCAGAGAAAGAAGATGAAAGCTTAGAG
GTCATTAGATTAAAATGCGGGAGTCTATTCGCTCTATCCAATGTGGCAGGTACTATGTTAGCAACTGGAAAGTTTAGTGA
AACTGTTGAAACGTATTCCTATTACAAAGGAATGTTTGAACAGATATATAGTGATTATCTGGCTCTTTTCAGCTCTAAAC
GCAGTGATATTTTAAAAGATAAACACACGTTAATCAACTTGTACCTTAAGAGGCTGTTTAACGAGCCTTCTGAAAAATTG
GTCCGTATGTTTTCTCATAGAGAAACACACCTTAAGTTTATATCTGATAAAAACATTTTTATTCAGACATTAACTGATGC
AGGTGTTACTCAGTATGTTTCAGTTTTACACCAATTGTATAAGCAAAAATGTGAAAATGCTATAGAGAGACTAAATCTTG
AAAACAGTAAAATAGATAAATTGAAAAAATATGTAGTTAATAGGGGGATTGAAGTATAA

Domains


Predicted by InterproScan.

(62-247)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

62.105

91.346

0.567