Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   QTN52_RS15890 Genome accession   NZ_CP128551
Coordinates   3185165..3187474 (-) Length   769 a.a.
NCBI ID   WP_087634938.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM123441     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3180165..3192474
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QTN52_RS15850 (QTN52_15850) - 3180625..3181056 (+) 432 WP_087634939.1 Na(+)/H(+) antiporter subunit B -
  QTN52_RS15855 (QTN52_15855) - 3181056..3181397 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  QTN52_RS15860 (QTN52_15860) - 3181390..3182871 (+) 1482 WP_017419418.1 Na+/H+ antiporter subunit D -
  QTN52_RS15865 (QTN52_15865) - 3182877..3183353 (+) 477 WP_017419419.1 Na+/H+ antiporter subunit E -
  QTN52_RS15870 (QTN52_15870) - 3183353..3183637 (+) 285 WP_017419420.1 Na(+)/H(+) antiporter subunit F1 -
  QTN52_RS15875 (QTN52_15875) mnhG 3183621..3183995 (+) 375 WP_017419421.1 monovalent cation/H(+) antiporter subunit G -
  QTN52_RS15880 (QTN52_15880) - 3184035..3184418 (-) 384 WP_017419422.1 hotdog fold thioesterase -
  QTN52_RS15885 (QTN52_15885) comA 3184440..3185084 (-) 645 WP_014418762.1 response regulator transcription factor Regulator
  QTN52_RS15890 (QTN52_15890) comP 3185165..3187474 (-) 2310 WP_087634938.1 histidine kinase Regulator
  QTN52_RS15895 (QTN52_15895) - 3187494..3187670 (-) 177 WP_087634937.1 competence pheromone ComX -
  QTN52_RS15900 (QTN52_15900) comQ 3187670..3188608 (-) 939 WP_271243340.1 class 1 isoprenoid biosynthesis enzyme Regulator
  QTN52_RS15905 (QTN52_15905) degQ 3188739..3188879 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  QTN52_RS15910 (QTN52_15910) - 3189344..3189685 (+) 342 WP_014418765.1 hypothetical protein -
  QTN52_RS15915 (QTN52_15915) - 3189692..3190915 (-) 1224 WP_014418766.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 769 a.a.        Molecular weight: 89202.48 Da        Isoelectric Point: 8.2927

>NTDB_id=848874 QTN52_RS15890 WP_087634938.1 3185165..3187474(-) (comP) [Bacillus velezensis strain SRCM123441]
MKNFIKQFTISVIILSLVYVCYVSYININGIIIGTKVIENKNKQFQVIEMSETSYGKFVGLEKGDIILKINNEKPSAKFL
KGDNLSHIKSLDVSRNGKQIHLDDFDIVNLDKSYSFFVFVLPLVFYFLSIVCIFYILKVNQTRKSFAGYILILFLLDISI
AYISAGGPFRGHSFNRYVNLFTFIASPIFYLQFIQQYFEELGKKFANRLINFLYIFPIFNIIMEFFRKKLPFDNIITNLN
LISFFLVTLSGFVLVFYHLYKYKYSEHAYILKVLILTNTLSFAPFLLFYVVPNILTGDYIFPALASASLLVLIPFGLVYQ
FVANKIFDIEFILGRMRYYTLLAVIPTLVIVGVLSVWAGTDELQMNPIRQTVFIFIVMFAVFYFKEIIDFKFRLKRFSEK
FNYQDSIFKYTQFIRSITSLKQMFKELKKTILDVLLVSKAYVFEVTSEGDILFHDKKDNEPDWEMYSKEFKKVTSEIGKI
IELNRGFLIKIGERGGSSYVLLCLSTINTPRLTRDEISWLKTLSFYTSVSMENVIQIEELMNHLQDLKQQGSNPVWLKKL
MFTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCHIEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYD
LGLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDG
VGCNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2310 bp        

>NTDB_id=848874 QTN52_RS15890 WP_087634938.1 3185165..3187474(-) (comP) [Bacillus velezensis strain SRCM123441]
GTGAAAAACTTTATTAAACAATTCACTATTTCAGTTATTATCTTAAGCCTCGTTTATGTTTGCTATGTTTCTTATATAAA
CATAAATGGGATTATAATCGGAACAAAAGTTATTGAAAACAAAAACAAACAATTCCAAGTAATAGAGATGTCAGAAACTT
CTTACGGGAAATTCGTAGGTTTAGAAAAAGGCGACATCATTCTAAAAATCAACAATGAAAAACCATCTGCTAAATTTTTA
AAAGGGGATAATCTTAGTCATATCAAAAGTTTAGATGTGAGCAGAAATGGAAAGCAAATTCATTTAGATGATTTTGATAT
TGTCAATTTAGACAAATCCTATAGCTTTTTTGTATTCGTTCTTCCACTTGTGTTTTATTTTTTAAGTATAGTATGTATAT
TTTACATTCTAAAGGTGAATCAAACAAGAAAATCGTTTGCGGGATACATTTTAATTTTGTTCTTGTTAGATATTTCAATT
GCTTATATAAGCGCAGGAGGACCATTTAGAGGACATTCATTTAACAGATATGTCAATTTGTTCACATTTATAGCTTCTCC
TATATTTTATCTTCAGTTCATACAACAATATTTTGAGGAATTAGGAAAGAAGTTTGCAAATCGTCTAATCAATTTCTTAT
ATATATTCCCGATTTTTAATATTATCATGGAGTTTTTTCGTAAGAAATTACCTTTTGACAACATTATAACAAACCTTAAT
CTTATCTCGTTTTTTCTCGTTACTCTTTCAGGTTTTGTTCTCGTGTTCTATCACTTATATAAATATAAATATTCAGAGCA
TGCTTATATTTTGAAAGTTTTAATTCTGACAAATACACTTTCTTTTGCTCCATTTTTACTTTTTTACGTCGTACCTAATA
TTTTAACTGGTGATTATATCTTTCCAGCACTGGCATCAGCCTCATTGCTTGTTCTTATTCCATTTGGATTAGTATATCAG
TTTGTTGCAAATAAAATATTTGATATAGAATTTATATTAGGAAGAATGAGATATTATACTTTACTGGCTGTAATCCCAAC
GCTAGTTATTGTCGGAGTTTTATCGGTCTGGGCGGGAACAGATGAGCTTCAAATGAATCCTATTAGACAGACTGTTTTCA
TCTTTATCGTAATGTTTGCTGTATTTTACTTTAAAGAAATAATAGATTTTAAATTTCGTTTAAAACGTTTTTCTGAAAAA
TTTAATTATCAAGATAGTATATTCAAATATACCCAGTTTATCAGAAGTATAACATCTTTAAAACAAATGTTTAAAGAACT
AAAAAAGACGATTCTGGATGTTCTACTTGTCAGTAAAGCTTATGTCTTTGAAGTTACCTCTGAGGGTGACATTTTATTTC
ATGATAAAAAGGATAATGAGCCTGACTGGGAAATGTATTCAAAAGAATTTAAGAAAGTTACTTCAGAGATTGGAAAAATC
ATTGAGCTAAACCGCGGTTTTTTAATCAAGATAGGAGAACGCGGGGGAAGTTCTTATGTTTTGCTTTGTTTGTCCACTAT
TAATACACCGAGACTGACACGAGATGAGATTTCATGGCTGAAAACATTGTCTTTCTATACGAGTGTCTCTATGGAAAATG
TGATACAGATCGAAGAACTCATGAACCATTTACAAGACCTGAAACAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTG
ATGTTTACGATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTT
GAAGCGCCAGTGTGAACTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCCTGCCACATAGAGGTGCAGGACAAGCTTCATC
AGATGAATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGTCCTCAGCTGCTGTATGAT
TTGGGTCTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGG
CCGGTTTACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAACGCCATGA
AGCATTCACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGT
GTCGGATGCAATCAGGAAGAAGGCGGCGGGCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGTGTCCGGGCGCT
TGACGGACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(569-638)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

75.616

100

0.758