Detailed information NTG0848655

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: LU678_RS09800
• Genome accession: NZ_CP128544
• Coordinates: 2059110..2061326 (+)
• Length: 738 a.a.
• NCBI ID: WP_232853716.1
• Uniprot ID: -
• Organism: Pseudomonas mosselii strain NMI4849_14
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2054110..2066326

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LU678_RS09770 (LU678_009770)	-	2055071..2055310 (-)	240	WP_028690971.1	DUF3077 domain-containing protein	-
LU678_RS09775 (LU678_009775)	-	2055307..2055546 (-)	240	WP_062361654.1	hypothetical protein	-
LU678_RS09780 (LU678_009780)	-	2055976..2056599 (+)	624	WP_069017520.1	glutathione S-transferase	-
LU678_RS09785 (LU678_009785)	-	2056732..2057664 (+)	933	WP_028690973.1	ABC transporter ATP-binding protein	-
LU678_RS09790 (LU678_009790)	-	2057661..2058440 (+)	780	WP_028690974.1	ABC transporter permease	-
LU678_RS09795 (LU678_009795)	-	2058324..2058965 (-)	642	WP_139121109.1	DUF2062 domain-containing protein	-
LU678_RS09800 (LU678_009800)	comA	2059110..2061326 (+)	2217	WP_232853716.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
LU678_RS09805 (LU678_009805)	exbB	2061509..2062144 (+)	636	WP_028690976.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
LU678_RS09810 (LU678_009810)	-	2062141..2062575 (+)	435	WP_028690977.1	biopolymer transporter ExbD	-
LU678_RS09815 (LU678_009815)	lpxK	2062575..2063579 (+)	1005	WP_062361664.1	tetraacyldisaccharide 4'-kinase	-
LU678_RS09820 (LU678_009820)	-	2063614..2063799 (+)	186	WP_011532874.1	Trm112 family protein	-
LU678_RS09825 (LU678_009825)	kdsB	2063796..2064560 (+)	765	WP_028690979.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
LU678_RS09830 (LU678_009830)	-	2064560..2065024 (+)	465	WP_069017523.1	low molecular weight protein-tyrosine-phosphatase	-
LU678_RS09835 (LU678_009835)	murB	2065021..2066040 (+)	1020	WP_028690981.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 738 a.a.
• Molecular weight: 79808.58 Da
• Isoelectric Point: 11.1091

>NTDB_id=848655 LU678_RS09800 WP_232853716.1 2059110..2061326(+) (comA) [Pseudomonas mosselii strain NMI4849_14]
MRTGMLALVLGLLSLRFLPALPPVGWLIPLLLLALACLRTRARPLGWFVLGGCWACWSAQQALDDRLPAALDGRTLWLEG
RVVGLPTRTERGVRFELEQPQSRRARLPQRVQLSWLEGPPLRAGEHWRLAVNLRRPQGLLNPHGPDQEATLLARRVGATG
TVKAGMRQGEEASSWRDGLRQRLLATDAHGREAALAALVLGDGAGLAREDWQVLQATGTVHLLVISGQHIGLLAGLVYGL
VAGLARLGGWPRRLPWLPWACGLAMAAALGYGWLAGFGVPVQRACLMLAVVLLWRLRFRHLGAWVPLLMALSGVLLVEPL
ASLLPGFWLSFAAVAVLVLCFAARLGAWRPWQAWTRAQWVIVVGLLPVLLALGLPVSLSAPLANLLAVPWLSWGVLPLAL
LGTALLPVPGLGEGMLWLAGLSLDGLFAVLTRLAGLRPAWIPEPLPLWAWLLVCLGAVLVLLPRGVPLRAPGVVLLLALW
APREQVPPGQVEVWQLDVGQGLAVLLRTRNHALLYDAGPAQGGSDLGETVVLPTLRKLGVKALDVMLISHGHADHAGGAA
AVRRGVSVARVLAGEVAGLEAASLCRSGERWQWDGVDFELWHWPQGASSNERSCVLRVQAKGERLLLAGDMEAGAERAWL
AATDDPRVDWLQAPHHGSRTSSSEPFVQATAPRGVLVSRGRHNGFGHPHGQVIERYRRHGVVVHDTALEGALRLVLGSRG
GVEGVRRERRFWREVDEG

Nucleotide

• Length: 2217 bp

>NTDB_id=848655 LU678_RS09800 WP_232853716.1 2059110..2061326(+) (comA) [Pseudomonas mosselii strain NMI4849_14]
ATGCGCACAGGGATGCTGGCGTTGGTCCTCGGGCTGTTGAGCCTGCGCTTTTTACCTGCCCTGCCACCGGTCGGATGGCT
GATTCCATTGCTGTTGCTGGCCCTGGCCTGCCTGCGCACCCGGGCCAGGCCGCTGGGTTGGTTCGTGCTGGGTGGCTGCT
GGGCCTGCTGGTCGGCGCAGCAGGCCCTGGACGACCGCCTGCCGGCCGCGCTGGATGGCCGCACGCTGTGGCTGGAGGGG
CGGGTGGTCGGCCTGCCGACCCGTACCGAGCGCGGCGTGCGTTTCGAGCTGGAGCAGCCGCAGTCACGTCGGGCCCGGTT
GCCGCAGCGGGTGCAATTGAGCTGGTTAGAGGGGCCGCCGCTGCGAGCGGGGGAGCACTGGCGGCTGGCGGTCAACCTGC
GTCGGCCGCAGGGCCTGCTCAACCCCCATGGCCCGGATCAGGAGGCCACGCTGTTGGCGCGGCGGGTCGGTGCCACCGGC
ACGGTCAAGGCCGGCATGCGCCAGGGCGAGGAGGCCAGCAGTTGGCGCGACGGCCTGCGCCAGCGCCTGCTGGCCACCGA
TGCCCATGGCCGGGAGGCGGCGTTGGCCGCCCTGGTGCTCGGGGATGGCGCAGGCCTGGCGCGGGAGGACTGGCAGGTGC
TGCAGGCCACCGGCACGGTACACCTGCTGGTGATTTCCGGGCAGCACATCGGCTTGCTGGCCGGATTGGTCTACGGGCTG
GTGGCGGGGCTGGCACGCCTGGGGGGGTGGCCACGGCGCCTGCCGTGGCTGCCCTGGGCCTGTGGCCTGGCGATGGCGGC
GGCATTGGGCTACGGCTGGCTGGCGGGGTTCGGCGTGCCGGTGCAGCGGGCGTGCCTGATGCTGGCGGTGGTGCTGCTCT
GGCGCTTGCGCTTTCGCCATCTGGGCGCCTGGGTGCCGTTGCTGATGGCGCTGTCGGGCGTGCTGCTGGTCGAGCCGCTG
GCCAGCCTGTTGCCGGGTTTCTGGCTGTCGTTCGCTGCCGTGGCGGTGCTGGTGCTGTGTTTTGCCGCCCGGCTGGGTGC
CTGGCGGCCCTGGCAGGCCTGGACCCGCGCCCAGTGGGTGATCGTCGTGGGGTTGCTGCCGGTGCTGCTGGCCTTGGGGC
TGCCCGTCAGTCTCAGCGCGCCGCTGGCCAATCTGCTGGCGGTGCCGTGGCTCAGCTGGGGCGTGCTGCCGTTGGCGTTG
CTGGGTACGGCCCTGCTGCCGGTGCCTGGGCTGGGGGAGGGGATGCTGTGGCTGGCGGGCCTGTCGTTGGATGGGTTGTT
TGCCGTGCTGACGCGATTGGCAGGGCTGCGGCCGGCCTGGATTCCCGAGCCACTGCCGTTGTGGGCCTGGCTGCTGGTGT
GCCTGGGCGCCGTGCTGGTGTTGCTGCCCCGGGGCGTGCCGTTGCGGGCGCCGGGCGTGGTCCTGCTGTTGGCGCTGTGG
GCGCCACGCGAACAGGTGCCGCCGGGGCAGGTGGAGGTCTGGCAGCTGGATGTGGGGCAGGGCCTGGCGGTGCTGCTGCG
CACCCGCAATCACGCGCTGCTGTATGACGCAGGCCCGGCCCAGGGTGGCAGTGACCTGGGCGAGACGGTGGTGCTGCCGA
CCTTGCGCAAGCTTGGGGTGAAGGCGCTGGACGTGATGCTGATCAGCCATGGCCATGCCGACCATGCCGGTGGGGCGGCG
GCCGTGCGGCGTGGGGTTTCGGTGGCGCGAGTGCTGGCCGGCGAGGTTGCCGGGCTGGAAGCGGCCTCGCTGTGCCGCAG
TGGCGAGCGCTGGCAGTGGGATGGCGTCGATTTCGAGCTCTGGCACTGGCCGCAGGGGGCTTCCAGCAACGAACGCTCCT
GTGTGTTGCGCGTGCAGGCCAAGGGCGAACGCCTGCTGCTGGCCGGGGACATGGAGGCCGGCGCGGAGCGGGCCTGGCTG
GCCGCGACCGACGATCCTCGGGTGGACTGGTTGCAGGCGCCGCACCATGGCAGCCGCACGTCGTCCAGCGAGCCGTTCGT
CCAGGCCACGGCGCCGCGCGGGGTGTTGGTTTCCCGGGGGCGGCACAATGGTTTCGGGCATCCCCATGGGCAGGTGATCG
AGCGCTATCGCCGGCACGGGGTGGTGGTGCATGACACGGCGTTGGAGGGGGCGTTGCGGTTGGTGCTGGGGAGTCGGGGT
GGGGTGGAAGGTGTGCGCAGGGAGCGGCGGTTCTGGCGTGAGGTTGACGAGGGCTGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (198-462)

• Domain of unknown function (DUF4131) (DUF4131) (20-164)

• Metallo-beta-lactamase superfamily (Lactamase_B) (497-664)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	59.944	97.425	0.584
comA	Ralstonia pseudosolanacearum GMI1000	35.514	100	0.412