Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   V5G23_RS00400 Genome accession   NZ_CP144925
Coordinates   73065..74366 (+) Length   433 a.a.
NCBI ID   WP_009328704.1    Uniprot ID   -
Organism   Bacillus licheniformis strain CP13     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 68065..79366
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V5G23_RS00375 (V5G23_00375) - 68145..69143 (-) 999 WP_009328699.1 ABC transporter ATP-binding protein -
  V5G23_RS00380 (V5G23_00380) - 69151..70110 (-) 960 WP_009328700.1 ABC transporter permease -
  V5G23_RS00385 (V5G23_00385) - 70115..71041 (-) 927 WP_009328701.1 ABC transporter permease -
  V5G23_RS00390 (V5G23_00390) - 71057..71881 (-) 825 WP_009328702.1 M55 family metallopeptidase -
  V5G23_RS00395 (V5G23_00395) proG 72097..72909 (-) 813 WP_009328703.1 pyrroline-5-carboxylate reductase ProG -
  V5G23_RS00400 (V5G23_00400) htrA 73065..74366 (+) 1302 WP_009328704.1 trypsin-like peptidase domain-containing protein Regulator
  V5G23_RS00405 (V5G23_00405) - 74540..74902 (-) 363 WP_003180937.1 hypothetical protein -
  V5G23_RS00410 (V5G23_00410) - 75295..76248 (-) 954 WP_011197826.1 ring-cleaving dioxygenase -
  V5G23_RS00415 (V5G23_00415) - 76568..77896 (+) 1329 WP_009328706.1 amino acid permease -
  V5G23_RS00420 (V5G23_00420) - 77934..78818 (-) 885 WP_003180929.1 carbohydrate ABC transporter permease -

Sequence


Protein


Download         Length: 433 a.a.        Molecular weight: 45756.04 Da        Isoelectric Point: 4.8308

>NTDB_id=848070 V5G23_RS00400 WP_009328704.1 73065..74366(+) (htrA) [Bacillus licheniformis strain CP13]
MMEYNREDQLETKNELIVSDQKPDQAIKKAEQQKRRLSWMTPILSGIIGGSLVLGVTTYQHSKDETANTSVQTQTNETSN
SSASSTKANTEKLSSTNSSDISTMVENVSPAIVGISNYQKQTESGMFGFESNSSSSSEQETGTGSGVIYKKANGKAYIIT
NNHVVEGASKLTVSLSNGKEVEGKLLGSDSLTDLAVVEISADHVEKVASFGDSSSLKAGESVIAIGNPLGKDLSRTVTQG
IISGVDRTVSVDTSAGQTEMNVIQTDAAINPGNSGGALLNTKGEVIGINSMKISESGVEGIGFAIPSNDVKPIAEELMSK
GKIERPFIGIGMMDLEQVPENYQTGTLGLSGSQLNKGVYIRQVASGSPAEKAGLKENDVIVSFNGKETDTGSALRNLLYN
YAKIGDTVKVTLIRNGKTMTKQITLDQKESASS

Nucleotide


Download         Length: 1302 bp        

>NTDB_id=848070 V5G23_RS00400 WP_009328704.1 73065..74366(+) (htrA) [Bacillus licheniformis strain CP13]
ATGATGGAATATAATAGAGAAGATCAGCTTGAAACAAAAAACGAACTCATCGTCTCCGATCAAAAGCCCGACCAGGCGAT
AAAAAAAGCAGAACAGCAAAAGCGGAGACTCTCGTGGATGACGCCGATTCTCAGCGGCATCATCGGAGGAAGCCTCGTTC
TCGGCGTCACGACATACCAGCATAGCAAAGACGAAACGGCCAATACATCCGTCCAGACGCAAACAAACGAGACGTCGAAC
TCATCGGCTTCTTCCACTAAAGCGAATACCGAAAAATTGTCCAGCACCAATTCGTCCGACATTTCTACAATGGTTGAAAA
TGTATCTCCCGCCATCGTCGGTATTTCAAACTATCAAAAACAAACAGAGAGCGGTATGTTCGGTTTTGAAAGCAACAGCA
GCAGCTCAAGCGAACAAGAAACAGGCACAGGCTCAGGTGTCATCTATAAAAAAGCAAACGGCAAAGCATACATTATTACA
AATAACCACGTTGTCGAAGGCGCGTCTAAACTGACGGTTTCCCTGTCCAACGGCAAAGAAGTGGAAGGTAAATTGCTGGG
CAGCGATTCGTTGACAGACCTTGCCGTTGTTGAAATTTCCGCTGATCACGTGGAAAAAGTCGCCTCTTTCGGCGATTCGT
CAAGCTTGAAAGCAGGCGAATCGGTGATCGCTATTGGAAACCCGCTCGGCAAAGATCTGTCCCGCACGGTGACACAAGGC
ATCATCAGCGGTGTTGATCGGACCGTTTCCGTAGATACATCCGCAGGCCAAACCGAGATGAACGTCATTCAAACCGACGC
GGCCATCAACCCCGGCAACAGCGGAGGCGCCCTTTTGAATACAAAGGGTGAAGTGATCGGCATCAACAGCATGAAAATCA
GTGAAAGCGGAGTAGAAGGCATCGGATTTGCGATTCCAAGCAATGATGTCAAACCGATTGCAGAAGAGCTGATGTCTAAA
GGAAAAATTGAGCGCCCGTTCATCGGAATCGGCATGATGGATCTTGAGCAGGTGCCGGAAAACTATCAAACAGGCACCCT
CGGATTAAGCGGCAGCCAGTTAAACAAAGGCGTCTACATCCGCCAGGTCGCTTCAGGCTCCCCAGCTGAAAAAGCGGGCC
TTAAAGAGAACGATGTCATCGTCAGCTTTAACGGAAAAGAAACCGATACAGGAAGCGCGCTGCGCAACCTTCTTTACAAC
TATGCAAAAATCGGGGATACGGTAAAGGTTACCCTCATTCGAAACGGCAAAACCATGACAAAACAAATCACCCTTGACCA
GAAAGAATCCGCATCATCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

42.04

92.841

0.39

  htrA Streptococcus gordonii str. Challis substr. CH1

38.971

94.226

0.367

  htrA Streptococcus mitis NCTC 12261

43.733

82.91

0.363