Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   QTN49_RS17995 Genome accession   NZ_CP128504
Coordinates   3608736..3608855 (-) Length   39 a.a.
NCBI ID   WP_003156334.1    Uniprot ID   I2C1C3
Organism   Bacillus velezensis strain SRCM123434     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 3603736..3613855
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QTN49_RS17970 (QTN49_17970) - 3603975..3604733 (-) 759 WP_022552588.1 ABC transporter ATP-binding protein -
  QTN49_RS17975 (QTN49_17975) - 3604727..3605674 (-) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  QTN49_RS17980 (QTN49_17980) ceuB 3605664..3606617 (-) 954 WP_104843085.1 ABC transporter permease Machinery gene
  QTN49_RS17985 (QTN49_17985) - 3607032..3608396 (+) 1365 WP_025649998.1 aspartate kinase -
  QTN49_RS17990 (QTN49_17990) - 3608491..3608586 (+) 96 WP_012116800.1 YjcZ family sporulation protein -
  QTN49_RS17995 (QTN49_17995) phrC 3608736..3608855 (-) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  QTN49_RS18000 (QTN49_18000) rapC 3608839..3609987 (-) 1149 WP_003156336.1 Rap family tetratricopeptide repeat protein Regulator
  QTN49_RS18005 (QTN49_18005) - 3610140..3611573 (-) 1434 WP_289414088.1 HAMP domain-containing sensor histidine kinase -
  QTN49_RS18010 (QTN49_18010) - 3611560..3612243 (-) 684 WP_014416901.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4228.96 Da        Isoelectric Point: 8.0285

>NTDB_id=848030 QTN49_RS17995 WP_003156334.1 3608736..3608855(-) (phrC) [Bacillus velezensis strain SRCM123434]
MKLKSKWFVICLAAAAIFTVTGAGQTDQAEFHVAERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=848030 QTN49_RS17995 WP_003156334.1 3608736..3608855(-) (phrC) [Bacillus velezensis strain SRCM123434]
ATGAAATTGAAATCTAAATGGTTTGTTATTTGTTTAGCAGCCGCCGCGATTTTTACAGTGACAGGTGCAGGCCAGACAGA
TCAGGCTGAATTCCATGTAGCTGAAAGAGGAATGACGTGA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C1C3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

70

100

0.718