Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QTN49_RS17980 Genome accession   NZ_CP128504
Coordinates   3605664..3606617 (-) Length   317 a.a.
NCBI ID   WP_104843085.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM123434     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3600664..3611617
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QTN49_RS17960 (QTN49_17960) - 3601543..3602967 (+) 1425 WP_014416906.1 MDR family MFS transporter -
  QTN49_RS17965 (QTN49_17965) - 3603009..3603953 (-) 945 WP_021495116.1 siderophore ABC transporter substrate-binding protein -
  QTN49_RS17970 (QTN49_17970) - 3603975..3604733 (-) 759 WP_022552588.1 ABC transporter ATP-binding protein -
  QTN49_RS17975 (QTN49_17975) - 3604727..3605674 (-) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  QTN49_RS17980 (QTN49_17980) ceuB 3605664..3606617 (-) 954 WP_104843085.1 ABC transporter permease Machinery gene
  QTN49_RS17985 (QTN49_17985) - 3607032..3608396 (+) 1365 WP_025649998.1 aspartate kinase -
  QTN49_RS17990 (QTN49_17990) - 3608491..3608586 (+) 96 WP_012116800.1 YjcZ family sporulation protein -
  QTN49_RS17995 (QTN49_17995) phrC 3608736..3608855 (-) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  QTN49_RS18000 (QTN49_18000) rapC 3608839..3609987 (-) 1149 WP_003156336.1 Rap family tetratricopeptide repeat protein Regulator
  QTN49_RS18005 (QTN49_18005) - 3610140..3611573 (-) 1434 WP_289414088.1 HAMP domain-containing sensor histidine kinase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34973.29 Da        Isoelectric Point: 9.6741

>NTDB_id=848029 QTN49_RS17980 WP_104843085.1 3605664..3606617(-) (ceuB) [Bacillus velezensis strain SRCM123434]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFIFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRLIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=848029 QTN49_RS17980 WP_104843085.1 3605664..3606617(-) (ceuB) [Bacillus velezensis strain SRCM123434]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTTATTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAATATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGACCTGATC
CAAAACCTGTCATCTTGGCTGCAGGGAGATTTCTCACTGGTTGTCAAAGGCAGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTCTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCCCACAC
CGCTCTCTTGGGCGCTGTTTTTGTACTGTTTTGCGACATTTTGGGAAGGTTGATCATTTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536