Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QTN48_RS19885 Genome accession   NZ_CP128503
Coordinates   3851959..3852912 (-) Length   317 a.a.
NCBI ID   WP_014416904.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM123422     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3846959..3857912
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QTN48_RS19865 (QTN48_19865) - 3847838..3849262 (+) 1425 WP_015388705.1 MDR family MFS transporter -
  QTN48_RS19870 (QTN48_19870) - 3849304..3850248 (-) 945 WP_017419271.1 siderophore ABC transporter substrate-binding protein -
  QTN48_RS19875 (QTN48_19875) - 3850270..3851028 (-) 759 WP_017419272.1 ABC transporter ATP-binding protein -
  QTN48_RS19880 (QTN48_19880) - 3851022..3851969 (-) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  QTN48_RS19885 (QTN48_19885) ceuB 3851959..3852912 (-) 954 WP_014416904.1 ABC transporter permease Machinery gene
  QTN48_RS19890 (QTN48_19890) - 3853325..3854689 (+) 1365 WP_053285479.1 aspartate kinase -
  QTN48_RS19895 (QTN48_19895) - 3854784..3854879 (+) 96 WP_012116800.1 YjcZ family sporulation protein -
  QTN48_RS19900 (QTN48_19900) phrC 3855029..3855148 (-) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  QTN48_RS19905 (QTN48_19905) rapC 3855132..3856280 (-) 1149 WP_003156336.1 Rap family tetratricopeptide repeat protein Regulator
  QTN48_RS19910 (QTN48_19910) - 3856439..3857866 (-) 1428 WP_103527150.1 HAMP domain-containing sensor histidine kinase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34959.26 Da        Isoelectric Point: 9.6741

>NTDB_id=847953 QTN48_RS19885 WP_014416904.1 3851959..3852912(-) (ceuB) [Bacillus velezensis strain SRCM123422]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRLIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=847953 QTN48_RS19885 WP_014416904.1 3851959..3852912(-) (ceuB) [Bacillus velezensis strain SRCM123422]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCAACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGATCTGATC
CAAAACCTGTCATCTTGGCTGCAGGGAGATTTTTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTTAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCCCACAC
CGCTCTCTTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGTTGATCATTTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

54.114

99.685

0.539