Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   QTN48_RS05190 Genome accession   NZ_CP128503
Coordinates   992471..993409 (+) Length   312 a.a.
NCBI ID   WP_289394878.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM123422     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 987471..998409
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QTN48_RS05160 (QTN48_05160) - 987503..987901 (+) 399 WP_003152031.1 DUF1694 domain-containing protein -
  QTN48_RS05165 (QTN48_05165) - 987998..988549 (+) 552 WP_003152033.1 isochorismatase family cysteine hydrolase -
  QTN48_RS05170 (QTN48_05170) - 988567..990033 (+) 1467 WP_106067969.1 nicotinate phosphoribosyltransferase -
  QTN48_RS05175 (QTN48_05175) - 990163..991386 (+) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -
  QTN48_RS05180 (QTN48_05180) - 991393..991734 (-) 342 WP_181816577.1 hypothetical protein -
  QTN48_RS05185 (QTN48_05185) degQ 992200..992340 (+) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  QTN48_RS05190 (QTN48_05190) comQ 992471..993409 (+) 939 WP_289394878.1 class 1 isoprenoid biosynthesis enzyme Regulator
  QTN48_RS05195 (QTN48_05195) - 993409..993585 (+) 177 WP_087634937.1 competence pheromone ComX -
  QTN48_RS05200 (QTN48_05200) comP 993605..995914 (+) 2310 WP_087634938.1 histidine kinase Regulator
  QTN48_RS05205 (QTN48_05205) comA 995995..996639 (+) 645 WP_014418762.1 response regulator transcription factor Regulator
  QTN48_RS05210 (QTN48_05210) - 996661..997044 (+) 384 WP_017419422.1 hotdog fold thioesterase -
  QTN48_RS05215 (QTN48_05215) mnhG 997084..997458 (-) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  QTN48_RS05220 (QTN48_05220) - 997442..997726 (-) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  QTN48_RS05225 (QTN48_05225) - 997726..998202 (-) 477 WP_017419419.1 Na+/H+ antiporter subunit E -

Sequence


Protein


Download         Length: 312 a.a.        Molecular weight: 35905.30 Da        Isoelectric Point: 6.1734

>NTDB_id=847902 QTN48_RS05190 WP_289394878.1 992471..993409(+) (comQ) [Bacillus velezensis strain SRCM123422]
MKTIIEQMCLDANQIKNRMKSIIERNIFNEHLLQLLLGFVESRKYLTFAESALFHYDVFGGKDFKTAEKLAAGIEILTLS
ADIIDDLEDEDNNQALWMKIDRSEALSAAFSLYTAGLQGINSINMNPLILTYILKYTQDAMQGQHDDIINKPEKEDESLE
VIRLKCGSLFALSNVAGTMLATGKFSETVETYSYYKGMFEQIYSDYLALFSSKRSDILKDKHTLINLYLKRLFNEPSEKL
VRMFSHRETHLKFISDKNIFIQTLTDAGVTQYVSVLHQLYKQKCENAIERLNLENSKIDKLKKYVVNRGIEV

Nucleotide


Download         Length: 939 bp        

>NTDB_id=847902 QTN48_RS05190 WP_289394878.1 992471..993409(+) (comQ) [Bacillus velezensis strain SRCM123422]
GTGAAGACAATTATTGAGCAAATGTGTTTAGATGCCAACCAAATCAAGAATAGAATGAAGAGTATAATAGAGCGGAACAT
ATTTAATGAACATTTACTGCAGCTTCTTCTTGGGTTTGTTGAATCCAGAAAATATTTAACCTTTGCTGAATCTGCTTTAT
TCCATTATGACGTTTTTGGCGGAAAAGATTTTAAGACTGCTGAGAAACTTGCGGCGGGAATTGAAATTCTTACGCTATCC
GCTGATATTATTGATGATCTTGAAGATGAGGATAACAATCAGGCTCTTTGGATGAAGATAGACCGTTCAGAAGCTTTAAG
CGCAGCTTTTTCATTATACACAGCAGGGCTGCAAGGGATTAATTCAATTAACATGAATCCCTTAATTCTTACTTACATAC
TGAAATATACACAAGACGCTATGCAAGGGCAGCACGATGATATAATTAATAAGCCAGAGAAAGAAGATGAAAGCTTAGAG
GTCATTAGATTAAAATGCGGGAGTCTATTCGCTCTATCCAATGTGGCAGGTACTATGTTAGCAACTGGAAAGTTTAGTGA
AACTGTTGAAACGTATTCCTATTACAAAGGAATGTTTGAACAGATATATAGTGATTATCTGGCTCTTTTCAGCTCTAAAC
GCAGTGATATTTTAAAAGATAAACACACGTTAATCAACTTGTACCTTAAGAGGCTGTTTAACGAGCCTTCTGAAAAATTG
GTCCGTATGTTTTCTCATAGAGAAACACACCTTAAGTTTATATCTGATAAAAACATTTTTATTCAGACATTAACTGATGC
AGGTGTTACTCAGTATGTTTCAGTTTTACACCAATTGTATAAGCAAAAATGTGAAAATGCTATAGAGAGACTAAATCTTG
AAAACAGTAAAATAGATAAATTGAAAAAATATGTAGTTAATAGGGGGATTGAAGTATAA

Domains


Predicted by InterproScan.

(62-247)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

61.754

91.346

0.564