Detailed information NTG0847895

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: QTN48_RS02875
• Genome accession: NZ_CP128503
• Coordinates: 562687..563850 (+)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain SRCM123422
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 557687..568850

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QTN48_RS02855 (QTN48_02855)	-	558115..559311 (+)	1197	WP_237586812.1	glycosyltransferase	-
QTN48_RS02860 (QTN48_02860)	-	559443..560519 (+)	1077	WP_003151382.1	MraY family glycosyltransferase	-
QTN48_RS02865 (QTN48_02865)	-	560619..561812 (-)	1194	WP_151140083.1	LCP family protein	-
QTN48_RS02870 (QTN48_02870)	-	561817..562464 (-)	648	WP_007407485.1	YigZ family protein	-
QTN48_RS02875 (QTN48_02875)	degS	562687..563850 (+)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
QTN48_RS02880 (QTN48_02880)	degU	563927..564616 (+)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
QTN48_RS02885 (QTN48_02885)	-	564714..565562 (+)	849	WP_237586810.1	DegV family protein	-
QTN48_RS02890 (QTN48_02890)	comFA	565670..567055 (+)	1386	WP_237586808.1	DEAD/DEAH box helicase	Machinery gene
QTN48_RS02895 (QTN48_02895)	-	567113..567397 (+)	285	WP_017418816.1	competence protein ComFB	-
QTN48_RS02900 (QTN48_02900)	comFC	567403..568092 (+)	690	WP_217425079.1	phosphoribosyltransferase family protein	Machinery gene
QTN48_RS02905 (QTN48_02905)	-	568166..568585 (+)	420	WP_014419009.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=847895 QTN48_RS02875 WP_007407484.1 562687..563850(+) (degS) [Bacillus velezensis strain SRCM123422]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=847895 QTN48_RS02875 WP_007407484.1 562687..563850(+) (degS) [Bacillus velezensis strain SRCM123422]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGAAGAGATGATTTAGAACGCCGGCTTTTAGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCAGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951