Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   QRA13_RS16945 Genome accession   NZ_CP128184
Coordinates   3452475..3454826 (+) Length   783 a.a.
NCBI ID   WP_286279635.1    Uniprot ID   -
Organism   Bacillus velezensis strain YJ0-1 isolate soil     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3447475..3459826
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRA13_RS16915 (QRA13_16915) - 3447497..3448963 (+) 1467 WP_224223774.1 nicotinate phosphoribosyltransferase -
  QRA13_RS16920 (QRA13_16920) - 3449093..3450316 (+) 1224 WP_007613436.1 EAL and HDOD domain-containing protein -
  QRA13_RS16925 (QRA13_16925) - 3450323..3450664 (-) 342 WP_007613435.1 hypothetical protein -
  QRA13_RS16930 (QRA13_16930) degQ 3451130..3451270 (+) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  QRA13_RS16935 (QRA13_16935) - 3451401..3452330 (+) 930 WP_224223773.1 polyprenyl synthetase family protein -
  QRA13_RS16940 (QRA13_16940) comX 3452327..3452497 (+) 171 WP_045208751.1 competence pheromone ComX -
  QRA13_RS16945 (QRA13_16945) comP 3452475..3454826 (+) 2352 WP_286279635.1 histidine kinase Regulator
  QRA13_RS16950 (QRA13_16950) comA 3454907..3455551 (+) 645 WP_003152052.1 response regulator transcription factor Regulator
  QRA13_RS16955 (QRA13_16955) - 3455573..3455956 (+) 384 WP_007613430.1 hotdog fold thioesterase -
  QRA13_RS16960 (QRA13_16960) mnhG 3455996..3456370 (-) 375 WP_007613429.1 monovalent cation/H(+) antiporter subunit G -
  QRA13_RS16965 (QRA13_16965) - 3456354..3456638 (-) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  QRA13_RS16970 (QRA13_16970) - 3456638..3457114 (-) 477 WP_007613428.1 Na+/H+ antiporter subunit E -
  QRA13_RS16975 (QRA13_16975) - 3457120..3458601 (-) 1482 WP_224223772.1 Na+/H+ antiporter subunit D -
  QRA13_RS16980 (QRA13_16980) - 3458594..3458935 (-) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  QRA13_RS16985 (QRA13_16985) - 3458935..3459366 (-) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -

Sequence


Protein


Download         Length: 783 a.a.        Molecular weight: 90916.04 Da        Isoelectric Point: 8.7203

>NTDB_id=846526 QRA13_RS16945 WP_286279635.1 3452475..3454826(+) (comP) [Bacillus velezensis strain YJ0-1 isolate soil]
MILLGVLKKQVNHGILKKFLKFFSVALLLFSIFYFTFVIYYTQNGIIIGTNVVQVSNQELKVVDMTRSSYGRLMGLEIGD
KIVEINGHKPNKENIYGSYLAKVRQLKVERNDKLIKLDNFEFIYLDSPYSFFSYIVPSIFYLLSLICIFYIFRVNLKKDS
ISAYILICFLLCISIAYLSAGGVTRGYPINRYINLYTFLAVPVLYLNFLYQYFKELNVKFSRGIYILILYNLPLVNIICE
LFEKHIKYNVITSLNLLTFLFEMMVVYVCLILYQIKHRKKDFAYLLKVLLVSNTIASLPFTLLYIVPLVIFGQYVYSAVI
TAPFLLLIPLALVYQFVVNKIYNIDFLLGRLRYYCLLAVIPTIGIVWVFVVFMNKNRDFNTFQITLFVFLIMLSVFYFKE
VLDYKFRLKRFSEKYNYQDSIFKYTQLIKSVSVLNQVFTHLKATILDVLPVSKAYIFEISSGGEIVYFDKQSTEPNWHPY
KDKFEKVNSEIGKIIEINQGFLMKIGERGTSSYVLLCLSSINTPKLTMDETSWLKTLSFYTSVSMENVLQIEELMDHLQN
LKQQGSNPVWLKKLMFTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMT
RETCHELRPQLLYDLGLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLI
SIQNKVILHYEDDGVGCNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2352 bp        

>NTDB_id=846526 QRA13_RS16945 WP_286279635.1 3452475..3454826(+) (comP) [Bacillus velezensis strain YJ0-1 isolate soil]
ATGATCCTGCTTGGCGTACTTAAAAAACAAGTGAACCATGGTATTTTGAAGAAGTTTTTAAAGTTTTTTTCGGTTGCCTT
ATTATTGTTTAGTATTTTCTATTTTACTTTTGTAATATATTATACTCAAAATGGAATAATTATAGGTACCAATGTCGTTC
AAGTTTCTAATCAAGAACTGAAAGTCGTTGATATGACAAGGTCCTCCTATGGAAGATTAATGGGGTTGGAAATTGGAGAC
AAAATTGTTGAAATAAATGGACATAAACCAAATAAAGAAAATATTTATGGCTCTTACCTAGCTAAAGTTAGACAATTAAA
AGTTGAGCGTAATGATAAGTTAATTAAATTAGATAACTTTGAATTTATCTATTTAGATAGCCCGTACAGTTTCTTTTCAT
ATATTGTACCAAGTATTTTTTATTTACTAAGTTTAATATGTATTTTTTACATCTTTAGAGTTAACTTAAAGAAAGACAGC
ATATCGGCATATATTCTGATTTGTTTTTTGCTATGTATATCTATTGCTTATTTAAGTGCCGGAGGAGTGACAAGGGGTTA
CCCTATAAATCGTTACATTAATCTTTATACATTTTTAGCAGTGCCTGTTTTGTATCTTAATTTCCTGTATCAATATTTTA
AAGAATTAAACGTGAAATTTTCACGAGGGATTTATATTCTAATTTTATATAATTTGCCTTTAGTGAATATCATATGTGAA
CTTTTTGAGAAACATATAAAGTATAATGTGATTACAAGCCTTAATCTCTTAACTTTTTTATTTGAAATGATGGTGGTTTA
TGTATGTCTTATACTTTATCAAATAAAGCATAGAAAAAAAGATTTTGCTTATTTGTTAAAAGTATTATTAGTATCTAATA
CCATTGCATCCTTACCTTTTACTTTATTATATATTGTTCCTCTTGTGATCTTTGGGCAATATGTATATAGTGCGGTAATC
ACTGCACCTTTTCTTTTGCTTATACCGTTAGCGCTGGTATATCAGTTTGTTGTTAATAAGATATATAATATTGATTTTTT
GCTGGGGCGCCTGCGTTATTATTGTTTATTAGCGGTTATCCCTACAATTGGAATCGTTTGGGTTTTTGTTGTGTTTATGA
ACAAAAATAGAGATTTTAATACTTTTCAAATCACCTTGTTTGTTTTTCTGATTATGCTTTCTGTTTTTTATTTTAAAGAA
GTGTTGGACTATAAGTTCCGCTTAAAGCGTTTCTCAGAAAAGTATAATTATCAAGACAGTATTTTTAAATACACACAATT
GATTAAAAGTGTGTCAGTCTTGAATCAAGTTTTCACACATCTTAAAGCGACGATTTTAGATGTTTTGCCAGTAAGCAAAG
CTTATATATTTGAAATTAGTTCTGGCGGAGAAATTGTGTATTTTGACAAACAAAGTACAGAACCAAATTGGCATCCCTAT
AAAGACAAATTTGAAAAGGTTAATTCGGAAATCGGCAAAATCATTGAGATTAATCAAGGGTTCCTCATGAAAATTGGCGA
GAGAGGAACAAGTTCTTATGTTTTGCTTTGTTTATCAAGCATAAATACGCCGAAACTTACAATGGATGAGACTTCATGGC
TGAAGACGTTATCATTTTATACCAGTGTATCGATGGAAAACGTTTTGCAAATTGAGGAACTTATGGATCACCTTCAAAAC
CTAAAACAACAAGGCTCAAACCCAGTCTGGCTCAAAAAGCTGATGTTTACGATCGAGGAAAAGCAGCGTTCGGATTTGGC
CCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAAGCGCCAGTGTGAGCTGTTTCTGGCCGATTTTAAGA
AAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGAATGAGCAGATGTCGGATGTCATTTTGATGACC
CGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTGGGTCTGGTCAAGGCGGTATCCAAGCTTGCCGCGCA
GCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGATTTACGGCGGCGCTGGATTTGGATACGCAGCTGA
ATTTGTACCGCATCATTCAGGAATTTCTTTCGAACGCCATGAAGCATTCACAGGCGAATGAGGTGCTGATTATGCTGATC
AGCATCCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGCTGCAATCAGGAAGAAGGCGGCGGGCAGTCGAT
GAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGACGGACGGATGAAAATCGACACAAGTGAAGGAAACG
GTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(583-652)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

59.663

98.467

0.587