Detailed information NTG0846519

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: QRA13_RS14985
• Genome accession: NZ_CP128184
• Coordinates: 3070616..3071779 (+)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain YJ0-1 isolate soil
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3065616..3076779

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QRA13_RS14965 (QRA13_14965)	-	3066017..3067213 (+)	1197	WP_224223857.1	glycosyltransferase	-
QRA13_RS14970 (QRA13_14970)	-	3067346..3068422 (+)	1077	WP_003151382.1	MraY family glycosyltransferase	-
QRA13_RS14975 (QRA13_14975)	-	3068521..3069741 (-)	1221	WP_105937243.1	LCP family protein	-
QRA13_RS14980 (QRA13_14980)	-	3069746..3070393 (-)	648	WP_007614107.1	YigZ family protein	-
QRA13_RS14985 (QRA13_14985)	degS	3070616..3071779 (+)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
QRA13_RS14990 (QRA13_14990)	degU	3071856..3072545 (+)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
QRA13_RS14995 (QRA13_14995)	-	3072643..3073491 (+)	849	WP_045209019.1	DegV family protein	-
QRA13_RS15000 (QRA13_15000)	comFA	3073600..3074985 (+)	1386	WP_224223856.1	DEAD/DEAH box helicase	Machinery gene
QRA13_RS15005 (QRA13_15005)	-	3075043..3075327 (+)	285	WP_003151389.1	competence protein ComFB	-
QRA13_RS15010 (QRA13_15010)	comFC	3075333..3076022 (+)	690	WP_198161198.1	phosphoribosyltransferase family protein	Machinery gene
QRA13_RS15015 (QRA13_15015)	-	3076096..3076515 (+)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=846519 QRA13_RS14985 WP_007407484.1 3070616..3071779(+) (degS) [Bacillus velezensis strain YJ0-1 isolate soil]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=846519 QRA13_RS14985 WP_007407484.1 3070616..3071779(+) (degS) [Bacillus velezensis strain YJ0-1 isolate soil]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCATGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGCGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATTATTGAAC
GGTCAGAATCATTAGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951