Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QRA13_RS10325 Genome accession   NZ_CP128184
Coordinates   2146284..2147237 (-) Length   317 a.a.
NCBI ID   WP_032872883.1    Uniprot ID   -
Organism   Bacillus velezensis strain YJ0-1 isolate soil     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2141284..2152237
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRA13_RS10305 (QRA13_10305) - 2142166..2143587 (+) 1422 WP_239033884.1 MDR family MFS transporter -
  QRA13_RS10310 (QRA13_10310) - 2143629..2144573 (-) 945 WP_007609406.1 siderophore ABC transporter substrate-binding protein -
  QRA13_RS10315 (QRA13_10315) - 2144595..2145353 (-) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  QRA13_RS10320 (QRA13_10320) - 2145347..2146294 (-) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  QRA13_RS10325 (QRA13_10325) ceuB 2146284..2147237 (-) 954 WP_032872883.1 ABC transporter permease Machinery gene
  QRA13_RS10330 (QRA13_10330) - 2147651..2149015 (+) 1365 WP_007609394.1 aspartate kinase -
  QRA13_RS10335 (QRA13_10335) - 2149110..2149211 (+) 102 WP_239033885.1 YjcZ family sporulation protein -
  QRA13_RS10340 (QRA13_10340) phrC 2149360..2149479 (-) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  QRA13_RS10345 (QRA13_10345) rapC 2149463..2150611 (-) 1149 WP_029326229.1 Rap family tetratricopeptide repeat protein Regulator
  QRA13_RS10350 (QRA13_10350) - 2150770..2152197 (-) 1428 WP_224224030.1 HAMP domain-containing sensor histidine kinase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34931.21 Da        Isoelectric Point: 9.6741

>NTDB_id=846500 QRA13_RS10325 WP_032872883.1 2146284..2147237(-) (ceuB) [Bacillus velezensis strain YJ0-1 isolate soil]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSVATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=846500 QRA13_RS10325 WP_032872883.1 2146284..2147237(-) (ceuB) [Bacillus velezensis strain YJ0-1 isolate soil]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCCAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTGTTCATGAAAATCCTCGAGAGAATCAAGTTTAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAATATCGTCAGTTCAGTCGCCACGTTTATCGCATATAAATACGACCTGATC
CAAAACCTGTCGTCCTGGCTGCAGGGGGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.481

99.685

0.533