Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   V3O04_RS02280 Genome accession   NZ_CP144242
Coordinates   488508..490553 (-) Length   681 a.a.
NCBI ID   WP_000204955.1    Uniprot ID   A0A0D5YE33
Organism   Acinetobacter baumannii strain SRM3     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 483508..495553
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V3O04_RS02245 (V3O04_02245) - 483992..484672 (+) 681 WP_000842362.1 outer membrane lipid asymmetry maintenance protein MlaD -
  V3O04_RS02250 (V3O04_02250) - 484699..485340 (+) 642 WP_001093907.1 ABC transporter substrate-binding protein -
  V3O04_RS02255 (V3O04_02255) - 485352..485639 (+) 288 WP_000250997.1 STAS domain-containing protein -
  V3O04_RS02260 (V3O04_02260) - 485709..486722 (-) 1014 WP_000888321.1 CorA family divalent cation transporter -
  V3O04_RS02265 (V3O04_02265) - 486880..487461 (+) 582 WP_001084310.1 TIGR00730 family Rossman fold protein -
  V3O04_RS02270 (V3O04_02270) - 487476..487877 (+) 402 WP_000849704.1 NUDIX domain-containing protein -
  V3O04_RS02275 (V3O04_02275) comF 487880..488515 (-) 636 WP_000472267.1 phosphoribosyltransferase family protein Machinery gene
  V3O04_RS02280 (V3O04_02280) recG 488508..490553 (-) 2046 WP_000204955.1 ATP-dependent DNA helicase RecG Machinery gene
  V3O04_RS02285 (V3O04_02285) - 490574..491389 (+) 816 WP_000547774.1 NAD(P)H-binding protein -
  V3O04_RS02290 (V3O04_02290) adeT2 491469..492455 (+) 987 WP_002058258.1 putative multidrug efflux protein AdeT2 -
  V3O04_RS02295 (V3O04_02295) plsB 492499..495069 (-) 2571 WP_000045410.1 glycerol-3-phosphate 1-O-acyltransferase PlsB -

Sequence

Protein


Download         Length: 681 a.a.        Molecular weight: 76426.00 Da        Isoelectric Point: 7.7228

>NTDB_id=846217 V3O04_RS02280 WP_000204955.1 488508..490553(-) (recG) [Acinetobacter baumannii strain SRM3]
MTSVHQLQGVGSASAALLEKLNIFTTDDLLFHLPRDYEDRSTIIPMNQLVVGRSYLLEGEVKSVDFPPGKRKSMAALIQD
EFGKVTLRFYHIYKNLTDKIKPGNRLRIFGEVRVGARGLELYHPEIQLINEHTPLPKTQLTAIYPSTDGLTQAKLREYVK
QALKHHSDALPELLPKQYTNGYALKEALHYIHEPPVDANMIQLAQGSHPAQQRLIFEELVAHQISLLTRRAYIRQIASPA
FPSSKVLAKKLLEALPFQMTNAQKRVSKEILNDLKQHQPMLRLVQGDVGAGKTLVAAVAACHALEADWQVALMAPTEILA
EQHYLNFKRWFEPLGITVAWLSGKQKGKARAHAEQQIKEGHAELIVGTHALFQDNVEFAKLGLVIIDEQHRFGVDQRLAL
RNKGAEQLTPHQLVMTATPIPRTLAMSAYGDLDTSIIDELPPGRTPIQTVTIPLDRREEVLQRIASNCREGKQAYWVCTL
VEQSETLDAQAAEATYQEMKERFPELNIGLVHGKMKADEKQAVMQAFKNNELQLLIATTVIEVGVDVPNASIMVIENAER
LGLSQLHQLRGRVGRGAKASFCVLLYKPPLSQNGQERLSILRESNDGFVIAEKDLELRGPGELLGTKQTGDMGFRVARLE
RDDHLLSQAHYVAQQVLKDYPEQADALLKRWLPEAPRYAYV

Nucleotide


Download         Length: 2046 bp        

>NTDB_id=846217 V3O04_RS02280 WP_000204955.1 488508..490553(-) (recG) [Acinetobacter baumannii strain SRM3]
ATGACTTCAGTCCATCAGTTACAAGGCGTTGGATCGGCTTCAGCAGCCCTACTCGAAAAACTAAATATTTTTACCACAGA
TGATTTGCTGTTTCATCTGCCCCGTGATTATGAAGATCGCAGTACCATTATTCCTATGAATCAATTGGTGGTTGGTCGTA
GTTATTTACTCGAGGGTGAAGTCAAATCTGTTGATTTCCCTCCAGGTAAACGTAAATCTATGGCCGCATTAATACAAGAT
GAATTTGGTAAGGTGACTTTACGCTTTTATCATATTTATAAAAATTTAACTGACAAAATAAAACCGGGTAACCGTTTACG
TATTTTTGGTGAAGTTCGTGTAGGTGCACGAGGACTTGAGCTTTATCATCCAGAAATTCAACTTATTAATGAACATACCC
CCCTTCCAAAAACGCAGCTCACAGCAATTTATCCAAGTACCGATGGCCTAACACAAGCTAAATTACGCGAATATGTTAAA
CAAGCGTTGAAGCATCATAGTGATGCCTTACCCGAGTTACTCCCTAAACAATATACAAATGGGTATGCACTCAAAGAAGC
TTTACATTACATTCATGAGCCACCAGTTGATGCCAATATGATCCAATTGGCTCAAGGCTCTCATCCTGCGCAGCAACGTC
TTATTTTTGAAGAGCTGGTCGCACATCAAATTAGTCTTCTCACTCGACGTGCTTATATTCGCCAAATTGCTTCACCTGCT
TTTCCGAGTAGTAAAGTACTTGCAAAAAAACTGCTAGAAGCTTTACCTTTTCAAATGACCAACGCACAAAAACGTGTATC
AAAAGAAATTTTAAACGACTTAAAACAACATCAACCTATGCTACGTTTGGTACAAGGTGATGTAGGGGCTGGAAAAACTT
TAGTTGCAGCGGTTGCAGCATGTCATGCATTGGAAGCAGATTGGCAAGTGGCTTTAATGGCACCCACCGAAATTTTAGCA
GAGCAGCATTATTTAAATTTTAAACGCTGGTTTGAACCTTTAGGTATTACGGTAGCTTGGTTGTCGGGTAAACAAAAAGG
GAAAGCGCGGGCACACGCTGAGCAACAAATTAAAGAAGGCCATGCTGAACTGATCGTGGGCACCCATGCCTTATTTCAAG
ATAACGTTGAGTTTGCAAAACTAGGACTCGTGATTATTGATGAACAGCACCGATTCGGGGTCGATCAACGATTAGCCTTA
CGCAATAAAGGCGCCGAACAGCTCACCCCACATCAACTGGTCATGACTGCAACGCCAATTCCTAGAACACTGGCAATGAG
TGCTTATGGCGATTTAGATACATCAATTATTGATGAATTACCGCCAGGTCGAACTCCAATTCAGACCGTCACGATTCCGC
TAGATCGTCGTGAAGAAGTACTGCAACGAATTGCTTCAAACTGCCGAGAAGGCAAACAGGCCTACTGGGTATGTACTCTG
GTTGAACAGTCCGAAACTTTAGATGCTCAAGCCGCCGAAGCCACCTATCAAGAAATGAAAGAGCGCTTTCCTGAACTTAA
TATTGGTTTGGTTCATGGTAAAATGAAAGCCGATGAAAAACAGGCCGTCATGCAAGCATTTAAAAACAATGAACTACAGC
TGCTAATTGCCACAACTGTTATTGAGGTTGGGGTAGATGTACCTAACGCTTCGATTATGGTCATTGAGAATGCTGAACGA
TTAGGGCTTTCACAGCTACACCAATTACGAGGGCGTGTAGGACGAGGTGCAAAAGCCAGTTTTTGTGTTCTTCTCTATAA
ACCACCACTTTCACAAAATGGGCAAGAAAGACTTTCAATTTTAAGAGAAAGTAATGATGGCTTTGTTATTGCTGAAAAAG
ATCTTGAGCTAAGAGGCCCGGGTGAGTTATTAGGAACAAAACAAACAGGTGATATGGGTTTCCGTGTCGCACGTTTAGAG
CGAGATGATCATTTATTGAGTCAAGCACACTACGTTGCACAACAAGTTCTAAAAGATTACCCTGAGCAAGCTGATGCCTT
ATTGAAGCGCTGGCTTCCCGAAGCTCCTCGATACGCATATGTTTAA

Domains

Predicted by InterProScan.

DEAD/DEAH box helicase (DEAD)

(262-422)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(605-663)

RecG wedge domain (RecG_wedge)

(7-163)

Helicase conserved C-terminal domain (Helicase_C)

(466-576)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D5YE33

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

49.925

98.238

0.49
  recG/mmsA Streptococcus pneumoniae R6

41.504

97.651

0.405
  recG/mmsA Streptococcus pneumoniae R36A

41.504

97.651

0.405
  recG Bacillus subtilis subsp. subtilis str. 168

38.574

100

0.389