Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   QRD87_RS15635 Genome accession   NZ_CP128109
Coordinates   2977583..2977723 (-) Length   46 a.a.
NCBI ID   WP_003213123.1    Uniprot ID   A0A5K1N966
Organism   Bacillus altitudinis strain D9_B_49     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2972583..2982723
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRD87_RS15610 (QRD87_15610) - 2972849..2973238 (-) 390 WP_008345855.1 hotdog fold thioesterase -
  QRD87_RS15615 (QRD87_15615) comA 2973262..2973903 (-) 642 WP_007500477.1 response regulator transcription factor Regulator
  QRD87_RS15620 (QRD87_15620) comP 2973984..2976296 (-) 2313 WP_058336868.1 ATP-binding protein Regulator
  QRD87_RS15625 (QRD87_15625) comX 2976350..2976520 (-) 171 WP_074041927.1 competence pheromone ComX -
  QRD87_RS15630 (QRD87_15630) - 2976517..2977431 (-) 915 WP_168948551.1 polyprenyl synthetase family protein -
  QRD87_RS15635 (QRD87_15635) degQ 2977583..2977723 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  QRD87_RS15640 (QRD87_15640) - 2978229..2978582 (+) 354 WP_017367963.1 hypothetical protein -
  QRD87_RS15645 (QRD87_15645) - 2978619..2979845 (-) 1227 WP_035701209.1 HDOD domain-containing protein -
  QRD87_RS15650 (QRD87_15650) - 2979986..2981455 (-) 1470 WP_007500472.1 nicotinate phosphoribosyltransferase -
  QRD87_RS15655 (QRD87_15655) - 2981473..2982024 (-) 552 WP_046526549.1 isochorismatase family cysteine hydrolase -
  QRD87_RS15660 (QRD87_15660) - 2982085..2982492 (-) 408 WP_173408242.1 YueI family protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5677.42 Da        Isoelectric Point: 4.6828

>NTDB_id=845868 QRD87_RS15635 WP_003213123.1 2977583..2977723(-) (degQ) [Bacillus altitudinis strain D9_B_49]
MEKYEIEELKQLLWKLENEIRETTASLHNINKSIDQYDKYEYVKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=845868 QRD87_RS15635 WP_003213123.1 2977583..2977723(-) (degQ) [Bacillus altitudinis strain D9_B_49]
ATGGAAAAGTATGAAATCGAAGAACTTAAACAACTATTATGGAAACTTGAAAACGAAATTAGAGAAACAACGGCTTCTCT
TCATAACATTAACAAAAGCATTGATCAATACGACAAATATGAATATGTGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1N966

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

68.085

100

0.696