Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   QRD87_RS15620 Genome accession   NZ_CP128109
Coordinates   2973984..2976296 (-) Length   770 a.a.
NCBI ID   WP_058336868.1    Uniprot ID   -
Organism   Bacillus altitudinis strain D9_B_49     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2968984..2981296
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRD87_RS15580 (QRD87_15580) - 2969390..2969821 (+) 432 WP_008345843.1 Na(+)/H(+) antiporter subunit B -
  QRD87_RS15585 (QRD87_15585) - 2969821..2970162 (+) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  QRD87_RS15590 (QRD87_15590) - 2970155..2971633 (+) 1479 WP_286108486.1 Na+/H+ antiporter subunit D -
  QRD87_RS15595 (QRD87_15595) - 2971640..2972119 (+) 480 WP_008345848.1 Na+/H+ antiporter subunit E -
  QRD87_RS15600 (QRD87_15600) - 2972119..2972400 (+) 282 WP_008345849.1 Na(+)/H(+) antiporter subunit F1 -
  QRD87_RS15605 (QRD87_15605) mnhG 2972384..2972758 (+) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  QRD87_RS15610 (QRD87_15610) - 2972849..2973238 (-) 390 WP_008345855.1 hotdog fold thioesterase -
  QRD87_RS15615 (QRD87_15615) comA 2973262..2973903 (-) 642 WP_007500477.1 response regulator transcription factor Regulator
  QRD87_RS15620 (QRD87_15620) comP 2973984..2976296 (-) 2313 WP_058336868.1 ATP-binding protein Regulator
  QRD87_RS15625 (QRD87_15625) comX 2976350..2976520 (-) 171 WP_074041927.1 competence pheromone ComX -
  QRD87_RS15630 (QRD87_15630) - 2976517..2977431 (-) 915 WP_168948551.1 polyprenyl synthetase family protein -
  QRD87_RS15635 (QRD87_15635) degQ 2977583..2977723 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  QRD87_RS15640 (QRD87_15640) - 2978229..2978582 (+) 354 WP_017367963.1 hypothetical protein -
  QRD87_RS15645 (QRD87_15645) - 2978619..2979845 (-) 1227 WP_035701209.1 HDOD domain-containing protein -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89578.19 Da        Isoelectric Point: 7.3068

>NTDB_id=845867 QRD87_RS15620 WP_058336868.1 2973984..2976296(-) (comP) [Bacillus altitudinis strain D9_B_49]
MKITYTKLSAFLVFLSFLFVIYVSYIYVFDIFNGARVAENKNGQAEVVKVEYLSLAYTSGLEEGDIILKINGEPANNKDH
LINGELRNVQRIDIQRGNQMITLKNKTLIGQESLFVYIIPLILYSICLFCIFFIIRINKEVQRKSAFLLVLFLLTICIGY
LSAGTSGIGDRFSHYVITFCLSSVFIFYIHFIYQYFKEFDLHITTRKTIYILYSLPITNLVIELFVPIDSAIARYMPSLN
LLFFFASIIMSFKVIINGMQKYKETEQGSVLKFFVMINIIAFCPFIFLFAIPYVLFRIYVVDPFFLTSFVLLIPFSLVYQ
FMTNKLYNMDFLISRLKYYGFLAITPTILVVVTFYILQKPEDLKYTLKLAFITYTLMLAVFYFKEILDFRFRLKRFSEKY
NYQDSVFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKANGEMIEIDESTNDSKLWKEYVDQFQDILGEVGKI
IELDKGFMMKIGERGGHSFMICCLSNIQTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQREANPAWLKKV
MFAMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNNQCPTSIENSLISWNEQMSKVIQTTRETCHELRPQLLYDL
GLVKAISKLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSKASQVLVMLICIKDQVVLHYEDD
GVGFDASQLDQHTMSMGLSGIRERVKALNGKLQIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=845867 QRD87_RS15620 WP_058336868.1 2973984..2976296(-) (comP) [Bacillus altitudinis strain D9_B_49]
ATGAAGATAACTTATACGAAACTATCTGCTTTTTTGGTTTTTCTGTCTTTTTTATTTGTGATCTATGTTTCATATATTTA
TGTATTTGATATTTTTAATGGAGCACGTGTTGCGGAGAACAAGAATGGTCAAGCAGAAGTTGTCAAAGTCGAATATCTTT
CTTTAGCCTACACATCAGGATTAGAAGAAGGAGATATTATACTTAAAATCAATGGAGAACCTGCTAACAATAAAGATCAT
TTGATCAATGGTGAGCTTAGGAATGTGCAAAGAATTGATATTCAAAGAGGCAACCAAATGATCACCCTAAAAAATAAGAC
ATTGATTGGTCAAGAAAGTTTATTTGTCTATATAATTCCTCTCATCCTGTATTCAATATGTTTATTTTGTATCTTCTTTA
TCATTCGTATTAACAAAGAGGTCCAACGAAAATCAGCATTTCTTTTAGTTTTATTTTTATTAACGATTTGTATCGGATAT
CTTAGTGCAGGTACTTCGGGTATTGGTGATAGATTTAGCCATTATGTCATCACATTTTGTTTATCAAGTGTATTTATCTT
TTATATTCATTTCATTTATCAATATTTCAAAGAGTTTGACCTGCATATAACGACTCGAAAAACAATTTATATTTTATATA
GTCTTCCTATAACTAATCTAGTAATAGAGCTGTTTGTTCCAATTGATTCGGCGATAGCCAGATACATGCCGAGTTTAAAT
CTTTTATTCTTTTTTGCTTCTATTATCATGTCATTCAAAGTCATTATTAATGGAATGCAGAAATATAAAGAGACAGAGCA
GGGGTCTGTTTTAAAGTTTTTTGTCATGATTAATATCATAGCATTTTGTCCGTTTATATTTTTATTTGCAATTCCATATG
TTTTGTTTCGTATTTATGTTGTAGATCCCTTTTTCTTAACTTCTTTTGTATTGCTCATTCCTTTTTCACTCGTGTATCAA
TTCATGACGAACAAACTTTACAATATGGATTTCTTGATTAGTAGACTTAAATACTATGGATTTCTTGCCATTACACCGAC
CATTTTAGTTGTTGTCACGTTTTATATTCTGCAAAAACCAGAAGATTTAAAGTACACACTGAAGCTCGCATTCATCACAT
ATACACTCATGTTGGCTGTTTTCTATTTTAAAGAAATTTTAGATTTCCGTTTTCGTTTGAAACGTTTTTCAGAGAAGTAT
AATTACCAAGACAGTGTGTTTAAATTTACGCAGCTTATTCGTGAGGCGTCATCACTTCATCAAGTACTGTATCATTTGAA
ATACACCATTTTAGAAGTGCTCGTTGTGAATAAAGCCTTTGTGCTAGAGGTGAAGGCTAATGGAGAAATGATTGAAATTG
ATGAATCAACAAATGATAGTAAGTTATGGAAAGAATACGTGGATCAATTTCAAGATATTTTAGGTGAAGTTGGGAAAATC
ATCGAGCTTGATAAAGGGTTTATGATGAAAATTGGAGAGCGGGGCGGTCACTCGTTTATGATTTGCTGCTTATCCAATAT
ACAGACGCCGAAATTGACCCGCGATGAAATCTCATGGCTGAAAACATTGGCATTTTACACAAGTGTCAGTTTAGAAAATG
TCGTCAAGATCGAAGAACTGATGGAGCATCTTGAGGATTTGAAACAGCGGGAAGCCAATCCCGCCTGGCTGAAGAAAGTC
ATGTTCGCCATGGAAGAGAAGCAGCGCTCAGATTTAGCGAGGGATCTTCATGATTCTGTGCTGCAGGATTTGATTTCACT
GAAGAGACAGTCCGAGATGTTCTTAACCAATTTCCAAAACAACCAATGCCCAACATCTATTGAAAATTCATTGATCTCAT
GGAATGAACAAATGTCTAAGGTGATTCAAACCACGAGAGAAACATGTCATGAACTTCGGCCGCAGCTCCTCTATGATTTG
GGGTTAGTGAAGGCAATTTCGAAGCTGACTTCGCAAATTCAAGAGGAAGCGCCATTTCATATTAGGCTGAATACAACCCG
CTTTGATAAAGAATTGGACATTGATATTGACTCACAGCTGAATATTTACCGGATAGTGCAGGAGCTGCTATCCAATGCGT
TGAAGCATTCTAAGGCCAGCCAAGTCTTAGTGATGCTCATTTGTATTAAAGATCAAGTTGTTCTCCATTATGAGGACGAT
GGAGTCGGATTTGATGCAAGCCAGCTTGATCAGCACACGATGAGCATGGGTCTTTCTGGCATAAGGGAACGAGTCAAAGC
TCTAAATGGAAAGCTTCAAATTCACACAGCACCTGAAAAAGGGCTCAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

48.774

100

0.491