Detailed information NTG0845241

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: QSG87_RS08455
• Genome accession: NZ_CP127923
• Coordinates: 1746646..1747842 (+)
• Length: 398 a.a.
• NCBI ID: WP_317024642.1
• Uniprot ID: -
• Organism: Acinetobacter chinensis strain SAAc573
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1741646..1752842

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QSG87_RS08445 (QSG87_08445)	-	1743395..1744600 (-)	1206	WP_087514067.1	amino acid aminotransferase	-
QSG87_RS08450 (QSG87_08450)	-	1745348..1746403 (+)	1056	WP_317024641.1	3-deoxy-7-phosphoheptulonate synthase	-
QSG87_RS08455 (QSG87_08455)	pilU	1746646..1747842 (+)	1197	WP_317024642.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
QSG87_RS08460 (QSG87_08460)	-	1747882..1749060 (-)	1179	WP_317024643.1	MFS transporter	-
QSG87_RS08465 (QSG87_08465)	-	1749321..1749647 (+)	327	WP_317024644.1	EF-hand domain-containing protein	-
QSG87_RS08470 (QSG87_08470)	gcvH	1749719..1750093 (-)	375	WP_317024645.1	glycine cleavage system protein GcvH	-
QSG87_RS08475 (QSG87_08475)	-	1750182..1751213 (-)	1032	WP_317024646.1	helix-turn-helix domain-containing protein	-
QSG87_RS08480 (QSG87_08480)	-	1751358..1751807 (-)	450	WP_087514061.1	MaoC family dehydratase	-

Sequence

Protein

• Length: 398 a.a.
• Molecular weight: 44726.02 Da
• Isoelectric Point: 6.5066

>NTDB_id=845241 QSG87_RS08455 WP_317024642.1 1746646..1747842(+) (pilU) [Acinetobacter chinensis strain SAAc573]
MYTSELLEEARRFMFHMLSKVVEYGGSDLFISADFPPSIKHQGLMKPIGQQALTAEKTRLFAYSLMNEKQRAEFETELEC
NFAISVPEVSRFRVNVFQQQLQVGMVIRTITAEIPNFAKLRLPESLKHVIMEKRGLILVVGGTGSGKSTSLAAMIDHRNE
NSAGHIITVEDPVEYVHKHKKSMITHREVGVDCHSWHNALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
ANNANQALDRIINFFPEERKNQLLMDLSSNMKAIISQRLIRTQDGRGRRAAVEILLNTPLIADNILKGQFHALKEIMTKS
RELGMQTFDQALFDLYNDSSISYEEAVRNADSMNELRLQIKLRSTRQDQAVPGSAAVFSVKSEEAETAEDTDSAQSAS

Nucleotide

• Length: 1197 bp

>NTDB_id=845241 QSG87_RS08455 WP_317024642.1 1746646..1747842(+) (pilU) [Acinetobacter chinensis strain SAAc573]
ATGTATACCAGTGAATTGTTGGAAGAAGCACGTCGTTTCATGTTTCATATGCTGAGTAAAGTTGTGGAATATGGTGGGTC
AGACCTGTTTATTTCAGCAGATTTTCCACCCAGTATTAAACATCAGGGGCTGATGAAACCGATTGGGCAACAGGCATTAA
CCGCTGAGAAAACCAGACTGTTTGCCTATAGCCTGATGAATGAAAAACAACGGGCAGAGTTTGAAACTGAACTTGAATGT
AACTTTGCCATTTCAGTACCTGAGGTGTCACGGTTCCGGGTTAATGTCTTTCAGCAGCAGTTACAGGTGGGCATGGTCAT
TCGAACCATTACTGCAGAAATCCCAAATTTTGCCAAACTCAGGCTGCCTGAATCCCTGAAACACGTCATTATGGAAAAAC
GTGGTCTGATTCTGGTGGTAGGTGGAACAGGTTCAGGTAAATCAACGTCGCTTGCTGCCATGATCGATCATCGAAATGAA
AACTCAGCAGGACATATCATTACTGTTGAAGACCCGGTCGAATATGTCCATAAACATAAAAAATCCATGATTACGCATCG
TGAAGTCGGGGTCGATTGTCACTCATGGCACAATGCACTGAAAAATACTTTAAGACAGGCGCCAGATGTCATTCTGATCG
GAGAAATCCGAGATACAGAAACCATGGAACACGCCATTGCCTTTGCTGAAACAGGACATCTGTGTTTAGGGACTTTACAT
GCCAATAACGCTAATCAGGCTCTGGACCGGATTATTAACTTTTTCCCTGAGGAGCGTAAAAACCAGCTGCTGATGGACTT
ATCCTCAAATATGAAAGCCATTATTTCACAACGGTTGATTCGGACACAGGATGGTCGGGGCAGACGTGCAGCAGTAGAAA
TACTGCTGAATACACCTTTGATAGCAGATAACATTCTGAAAGGGCAGTTTCATGCACTGAAAGAGATTATGACCAAATCC
CGTGAACTGGGTATGCAGACTTTTGATCAGGCATTATTTGATTTATACAATGATTCTTCAATTTCCTATGAGGAAGCAGT
GCGTAATGCCGACTCAATGAATGAACTGAGGCTTCAGATTAAACTGCGTTCAACCCGACAGGATCAGGCTGTGCCTGGTA
GTGCAGCAGTATTTTCGGTAAAATCTGAAGAAGCTGAAACAGCAGAAGATACAGACTCTGCACAGTCTGCATCATAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (121-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	59.483	87.437	0.52
pilU	Acinetobacter baylyi ADP1	56.484	87.186	0.492
pilU	Vibrio cholerae strain A1552	50.42	89.698	0.452