Detailed information NTG0845230

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: QSG87_RS01190
• Genome accession: NZ_CP127923
• Coordinates: 218665..220035 (-)
• Length: 456 a.a.
• NCBI ID: WP_394357253.1
• Uniprot ID: -
• Organism: Acinetobacter chinensis strain SAAc573
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 213665..225035

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QSG87_RS01175 (QSG87_01175)	lptG	214732..215802 (+)	1071	WP_317023856.1	LPS export ABC transporter permease LptG	-
QSG87_RS01180 (QSG87_01180)	gpmI	215917..217464 (+)	1548	WP_317023857.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
QSG87_RS01185 (QSG87_01185)	-	217486..218655 (+)	1170	WP_317023858.1	S41 family peptidase	-
QSG87_RS01190 (QSG87_01190)	pilR	218665..220035 (-)	1371	WP_394357253.1	sigma-54-dependent transcriptional regulator	Regulator
QSG87_RS01195 (QSG87_01195)	pilS	220111..221682 (-)	1572	WP_087513574.1	PAS domain-containing sensor histidine kinase	Regulator
QSG87_RS01200 (QSG87_01200)	-	221707..222342 (-)	636	WP_087513575.1	response regulator	-
QSG87_RS01205 (QSG87_01205)	pbpG	222578..223642 (+)	1065	WP_317023860.1	D-alanyl-D-alanine endopeptidase PBP7/8	-
QSG87_RS01210 (QSG87_01210)	thrC	223736..224875 (-)	1140	WP_317023861.1	threonine synthase	-

Sequence

Protein

• Length: 456 a.a.
• Molecular weight: 51362.02 Da
• Isoelectric Point: 6.6513

>NTDB_id=845230 QSG87_RS01190 WP_394357253.1 218665..220035(-) (pilR) [Acinetobacter chinensis strain SAAc573]
MEMTLARMGIKTHIAHRLSEARQLLSEHQYDACLTDLNLPDGNGLELVNLISQHFPQLPVAVLTAYGNMEIAIAALKAGA
FDFVSKPVNQKHLEQLLEKALNKPVEKNSVPESDQLEHRMLIGQSLPIQHLRTTLKKIARSQAPVFITGESGTGKEVVAN
LIHRLSNRCEGPFIAINCGAIPGDLMESELFGHKKGSFTGATQDKQGLIQSAHGGSLFLDEIAELPLSMQVKLLRAVQEK
RIRPIGSEAEIDVDFRVISASHQDLEELVQQGRFRQDLFFRIHVMDLVLPALRERGSDILLLAQHFIHKICKEWDIETKP
LTERARQFLLEQYYPGNVRELRNIIERAITLSDDSQIDLQHLQSAPLRQFSVKPLQSSSETEETAPQAVSEPVVSSTRKL
PEEGLELHLEKVEKEILMNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDSDED

Nucleotide

• Length: 1371 bp

>NTDB_id=845230 QSG87_RS01190 WP_394357253.1 218665..220035(-) (pilR) [Acinetobacter chinensis strain SAAc573]
ATGGAAATGACCCTTGCACGTATGGGGATTAAAACACACATCGCACACCGCCTTTCAGAGGCGAGACAACTGCTTTCAGA
ACATCAGTATGATGCCTGTCTGACAGACCTGAATCTGCCTGATGGCAATGGTCTGGAGCTGGTCAATCTGATCTCGCAGC
ATTTCCCACAGCTTCCAGTGGCAGTATTGACTGCTTATGGAAATATGGAAATTGCGATCGCAGCACTGAAAGCCGGTGCC
TTTGATTTTGTCAGTAAACCTGTCAATCAGAAGCACCTGGAGCAGTTACTTGAAAAAGCACTGAACAAGCCTGTTGAAAA
AAACAGTGTCCCTGAATCTGATCAGCTCGAACACCGTATGCTGATTGGTCAGTCACTGCCGATTCAGCATCTGCGTACAA
CACTGAAAAAAATTGCCCGCTCCCAGGCACCTGTGTTTATTACGGGTGAATCCGGCACGGGTAAAGAAGTTGTTGCCAAT
CTGATCCATCGGCTCAGTAACCGCTGTGAAGGTCCTTTTATTGCCATCAACTGCGGTGCGATTCCTGGCGACCTGATGGA
AAGCGAACTGTTTGGCCATAAGAAAGGCAGTTTTACCGGTGCAACCCAGGATAAACAAGGCTTAATCCAGTCTGCACATG
GCGGCAGCCTGTTCCTCGATGAAATTGCTGAACTGCCTTTAAGCATGCAGGTCAAACTGTTACGCGCTGTTCAGGAAAAG
CGGATACGCCCTATTGGCAGTGAAGCAGAAATTGATGTCGATTTCCGAGTGATCAGTGCCAGTCACCAGGATCTGGAAGA
ACTGGTTCAACAGGGCAGATTCCGTCAGGATTTATTTTTCCGTATTCACGTCATGGACCTGGTACTGCCTGCACTGCGTG
AACGTGGCAGTGATATTTTACTGCTGGCGCAGCACTTCATTCATAAAATCTGTAAAGAATGGGATATTGAAACCAAACCT
CTGACAGAAAGAGCCCGCCAGTTCCTGCTTGAACAGTACTATCCAGGCAATGTCCGTGAACTTCGCAATATTATTGAACG
TGCCATCACGCTCAGTGATGACAGCCAGATTGATCTTCAGCATTTACAGAGCGCGCCTTTACGTCAGTTCTCGGTAAAAC
CGCTGCAAAGCAGCAGTGAAACTGAAGAAACAGCACCTCAGGCGGTCAGTGAACCTGTCGTTTCTTCCACACGGAAATTA
CCCGAGGAAGGTCTGGAACTTCATCTGGAGAAGGTTGAAAAAGAAATTCTGATGAATGCTTTGAATCTGACCCACTGGAA
CAGAACACTGGCAGCAAAAAAACTGGGAATGTCTTTCCGTTCTTTGCGCTACCGCCTGAAAAAATTCGGACTGGACAGCG
ACGAAGACTGA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (121-287)

• Bacterial regulatory protein, Fis family (HTH_8) (409-449)

• Response regulator receiver domain (Response_reg) (4-97)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	72.767	100	0.732
pilR	Pseudomonas aeruginosa PAK	49.558	99.123	0.491