Detailed information NTG0844958

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: QQ994_RS07150
• Genome accession: NZ_CP127872
• Coordinates: 1562311..1564527 (+)
• Length: 738 a.a.
• NCBI ID: WP_075046908.1
• Uniprot ID: A0A1L5PYQ8
• Organism: Pseudomonas asiatica strain RYYT.1b
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1557311..1569527

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QQ994_RS07125 (QQ994_07125)	-	1557462..1558985 (-)	1524	WP_286101254.1	hypothetical protein	-
QQ994_RS07130 (QQ994_07130)	-	1559176..1559799 (+)	624	WP_286101255.1	glutathione S-transferase	-
QQ994_RS07135 (QQ994_07135)	-	1559944..1560876 (+)	933	WP_046617069.1	ABC transporter ATP-binding protein	-
QQ994_RS07140 (QQ994_07140)	-	1560873..1561652 (+)	780	WP_003260104.1	ABC transporter permease	-
QQ994_RS07145 (QQ994_07145)	-	1561650..1562168 (-)	519	Protein_1386	DUF2062 domain-containing protein	-
QQ994_RS07150 (QQ994_07150)	comA	1562311..1564527 (+)	2217	WP_075046908.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
QQ994_RS07155 (QQ994_07155)	exbB	1564745..1565380 (+)	636	WP_016391244.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
QQ994_RS07160 (QQ994_07160)	-	1565377..1565811 (+)	435	WP_025338207.1	biopolymer transporter ExbD	-
QQ994_RS07165 (QQ994_07165)	lpxK	1565811..1566812 (+)	1002	WP_286101256.1	tetraacyldisaccharide 4'-kinase	-
QQ994_RS07170 (QQ994_07170)	-	1566857..1567042 (+)	186	WP_011532874.1	Trm112 family protein	-
QQ994_RS07175 (QQ994_07175)	kdsB	1567039..1567803 (+)	765	WP_286101257.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
QQ994_RS07180 (QQ994_07180)	-	1567803..1568267 (+)	465	WP_003259973.1	low molecular weight protein-tyrosine-phosphatase	-
QQ994_RS07185 (QQ994_07185)	murB	1568264..1569283 (+)	1020	WP_286101258.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 738 a.a.
• Molecular weight: 79546.25 Da
• Isoelectric Point: 9.6859

>NTDB_id=844958 QQ994_RS07150 WP_075046908.1 1562311..1564527(+) (comA) [Pseudomonas asiatica strain RYYT.1b]
MRTGMFALALGLLCLGFLPALPSVGWLVLLAVAGGLGLFTRLWPLGCFLLGLCWACWSAQQALDDRLATGLDGRTLWLEG
QVVGLPTRTAQGVRFELDAARSRRAELPQRLQLSWFDGPPLRAGEQWRLAVTLQRPAGLLNPHGPDREAQLLARRVGATG
TVKAGQLLAPVAGGWRDTLRQRLLAVEANGRQAALVALVLGDGAGLAREDWQTLQATGTVHLLVISGQHIGLVAGLLYGL
VAGLARWGLWPARLPWLPWACGLAMAAALAYGWLAGGGVPVQRACLMLAVVLLWRLRFRHLGATLPLLLALVAVLLVEPL
AALLPGFWLSFAAVATLGYCFSARLGGWRPWQAWTRAQWVIAIGLLPVLLATGLPVSLSAPLANLVAVPWVSLAVLPLAL
LGTLLLPLGGVGEVLLWLAGGLLDVLFRLLELVAQQQSAWLPAVLPLWAWLLVCLGTLLVLMPRGVPLRGLGGVMLLALW
VPRETVPFGQVEVWHLDVGQGLAVLLRTRHHDLLYDAGPARGESDLGERVVLPTLRKLGVGGLDLMLVSHAHADHAGGAG
AIMRGLPVERVIGGEVVDDMQLQPCVSGDQWTWDGVRFSLWRWADGQSSNDRSCVLLVEAQGERLLLAGDMEAGAERAWL
AATEAPRIDWLQSPHHGSRSSSSEAFIRATAPRGVLISRGRNNSFGHPHAQVVERYRRHGVVMHDTAEQGALRLVLGRQG
EVESVRRQRRFWRDAGGG

Nucleotide

• Length: 2217 bp

>NTDB_id=844958 QQ994_RS07150 WP_075046908.1 1562311..1564527(+) (comA) [Pseudomonas asiatica strain RYYT.1b]
ATGCGCACAGGGATGTTTGCGCTCGCGCTCGGGCTGTTGTGCCTGGGCTTTCTCCCCGCATTGCCATCGGTCGGATGGCT
GGTGCTGCTGGCTGTAGCCGGTGGCCTCGGCCTGTTCACCCGGCTGTGGCCGCTGGGCTGTTTTCTGCTGGGCCTGTGTT
GGGCCTGCTGGTCTGCGCAGCAGGCGCTGGATGACCGCCTGGCCACCGGGCTGGATGGCCGCACCTTGTGGCTTGAGGGC
CAGGTGGTCGGCCTGCCGACCCGGACTGCGCAGGGTGTGCGTTTCGAGCTGGACGCGGCCCGCTCGCGGCGGGCAGAGCT
GCCGCAGCGCCTGCAACTGAGCTGGTTCGACGGCCCGCCGCTGCGCGCGGGCGAGCAGTGGCGGCTGGCGGTGACCTTGC
AGCGCCCGGCGGGGCTGCTCAACCCGCATGGGCCGGACCGTGAGGCGCAATTGCTGGCGCGGCGGGTCGGCGCGACCGGT
ACGGTCAAGGCCGGGCAGTTGCTGGCGCCGGTTGCAGGCGGCTGGCGCGACACGCTGCGCCAGCGCCTGCTGGCAGTCGA
GGCCAATGGCCGGCAGGCAGCGTTGGTGGCGCTGGTGCTTGGCGACGGGGCGGGCCTGGCCCGGGAGGACTGGCAAACGT
TGCAGGCCACCGGCACGGTGCACCTGCTGGTGATCTCTGGCCAACACATCGGCCTGGTTGCCGGCTTGCTGTATGGCCTG
GTTGCCGGGCTGGCGCGTTGGGGGCTGTGGCCCGCTCGTCTGCCCTGGCTGCCCTGGGCGTGTGGCTTGGCCATGGCCGC
GGCACTGGCCTACGGTTGGTTGGCTGGTGGCGGTGTACCGGTGCAGCGTGCCTGCCTGATGCTGGCCGTGGTGTTGCTCT
GGCGCCTGCGCTTTCGCCACCTCGGTGCGACCTTGCCGCTGCTGCTGGCGCTGGTTGCCGTGCTGCTGGTGGAGCCGTTG
GCCGCGCTGCTGCCCGGGTTCTGGCTGTCGTTCGCGGCCGTGGCCACGCTTGGCTATTGCTTCAGTGCCCGCCTGGGCGG
CTGGCGGCCCTGGCAAGCCTGGACGCGGGCGCAATGGGTGATTGCCATCGGTTTGCTGCCGGTGCTGCTGGCTACGGGCT
TGCCCGTGAGCCTGAGTGCGCCGCTGGCCAACCTTGTTGCGGTGCCTTGGGTCAGCCTGGCGGTACTGCCGTTGGCGTTG
CTGGGGACTTTGCTGCTGCCGCTGGGCGGGGTAGGAGAGGTGCTGTTGTGGCTGGCGGGTGGTCTGCTCGATGTGCTTTT
CCGGCTGCTGGAGTTGGTGGCGCAACAGCAGTCGGCGTGGCTGCCAGCAGTTCTGCCGTTGTGGGCCTGGCTGCTGGTGT
GCCTGGGTACGCTGCTGGTTTTGATGCCCCGTGGCGTACCACTGCGCGGGTTGGGTGGCGTGATGCTGCTGGCGCTGTGG
GTACCCCGGGAGACGGTGCCGTTCGGCCAGGTCGAGGTCTGGCATCTGGACGTCGGCCAGGGGCTGGCGGTGCTGTTGCG
CACCCGGCATCACGACCTGCTGTACGACGCCGGGCCGGCCAGGGGAGAGAGCGACTTGGGCGAGCGAGTGGTGTTGCCGA
CCTTGCGCAAGCTAGGAGTGGGTGGCCTGGACCTGATGCTGGTCAGCCACGCCCATGCCGACCACGCCGGTGGTGCTGGC
GCAATCATGCGTGGTCTGCCGGTCGAACGGGTGATCGGCGGCGAAGTGGTGGATGACATGCAACTGCAGCCTTGTGTCAG
TGGCGACCAGTGGACGTGGGATGGCGTGCGCTTTTCGCTGTGGCGCTGGGCTGATGGGCAGAGCAGCAATGACCGCTCCT
GTGTGTTGCTGGTCGAGGCGCAGGGTGAGCGGTTGTTGCTGGCGGGAGATATGGAAGCCGGTGCCGAACGGGCCTGGCTG
GCGGCCACAGAAGCGCCGCGGATCGACTGGCTGCAGTCGCCGCACCATGGCAGCCGCAGTTCGTCCAGCGAGGCCTTCAT
CCGCGCCACGGCGCCGCGCGGGGTACTGATTTCGCGCGGGCGCAACAACAGCTTCGGGCACCCGCACGCGCAGGTGGTCG
AACGTTATCGGCGGCATGGGGTGGTGATGCATGACACGGCGGAGCAGGGCGCGTTGCGGTTGGTGTTGGGGAGGCAGGGG
GAGGTCGAGAGTGTGCGCCGACAGAGGCGTTTCTGGAGGGATGCGGGCGGTGGCTGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (21-167)

• Competence protein (Competence) (198-462)

• Metallo-beta-lactamase superfamily (Lactamase_B) (497-674)

3D structure

• AlphaFold DB: A0A1L5PYQ8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	59.805	97.425	0.583
comA	Ralstonia pseudosolanacearum GMI1000	35.324	100	0.377