Detailed information NTG0844764

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: QR692_RS05145
• Genome accession: NZ_CP127854
• Coordinates: 1033259..1034515 (-)
• Length: 418 a.a.
• NCBI ID: WP_019292770.1
• Uniprot ID: -
• Organism: Lactococcus petauri strain GB97
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1028259..1039515

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QR692_RS05115 (QR692_05115)	ald	1029012..1030118 (+)	1107	WP_019292776.1	alanine dehydrogenase	-
QR692_RS05120 (QR692_05120)	-	1030238..1031197 (+)	960	WP_019292775.1	PhoH family protein	-
QR692_RS05125 (QR692_05125)	-	1031199..1031672 (+)	474	WP_019292774.1	NUDIX hydrolase	-
QR692_RS05130 (QR692_05130)	ybeY	1031682..1032170 (+)	489	WP_019292773.1	rRNA maturation RNase YbeY	-
QR692_RS05135 (QR692_05135)	-	1032154..1032615 (+)	462	WP_019292772.1	diacylglycerol kinase family protein	-
QR692_RS05140 (QR692_05140)	-	1032618..1033262 (-)	645	WP_019292771.1	ComF family protein	-
QR692_RS05145 (QR692_05145)	comFA	1033259..1034515 (-)	1257	WP_019292770.1	DEAD/DEAH box helicase	Machinery gene
QR692_RS05150 (QR692_05150)	-	1034570..1035193 (+)	624	WP_019292769.1	YigZ family protein	-
QR692_RS05155 (QR692_05155)	-	1035206..1036228 (+)	1023	WP_019292768.1	DUF475 domain-containing protein	-
QR692_RS05160 (QR692_05160)	-	1036263..1037285 (-)	1023	WP_034999659.1	alpha/beta hydrolase	-
QR692_RS05165 (QR692_05165)	-	1037603..1038382 (+)	780	WP_019292766.1	formate/nitrite transporter family protein	-
QR692_RS05170 (QR692_05170)	glyQ	1038396..1039364 (+)	969	WP_019292765.1	glycine--tRNA ligase subunit alpha	-

Sequence

Protein

• Length: 418 a.a.
• Molecular weight: 48043.96 Da
• Isoelectric Point: 10.1835

>NTDB_id=844764 QR692_RS05145 WP_019292770.1 1033259..1034515(-) (comFA) [Lactococcus petauri strain GB97]
MNELYGRLLLQKELSKIPDKATLFDSMHDISRTVIMCNRCGKKSKKKEVLLPVGAYYCPHCIQMGRVRSDEKLYHLPQED
FLAASFLNWQGKLTAPQQYISDTLVKLHQQQKTVLVQAVTGAGKTEMIYQMIDNTLKKGKAVALTSPRIDVCLELYYRLK
RDFSCPISLLHGKSEKYSRSPLVIATTHQLMRFRHAFDLLIFDEVDAFPFPDNDMLSFALTQARKPSSSLIYLTATTTDN
LERQVKLGQIEKLQLPRRFHGFPLVLPQFFWQSKFYKMVKKQRESGFPLLIFVPEIRLGEKLNQDLQSSFPHEKIAFVAS
TSLERLEAVERFRQGNISILVSTTILERGVTFPKVDVFVFQSHHHNFTRSSLIQIAGRVGRSTERPDGKVFFFHLGKITA
MLEAYKNIRNMNKAGGFQ

Nucleotide

• Length: 1257 bp

>NTDB_id=844764 QR692_RS05145 WP_019292770.1 1033259..1034515(-) (comFA) [Lactococcus petauri strain GB97]
ATGAATGAATTATATGGTAGACTCCTTTTACAAAAAGAATTGTCGAAAATCCCAGACAAAGCAACACTTTTTGATAGTAT
GCACGATATTTCAAGAACAGTGATTATGTGCAATCGCTGTGGCAAAAAAAGTAAGAAAAAAGAGGTCCTACTCCCCGTTG
GTGCTTATTATTGTCCCCATTGTATTCAGATGGGACGTGTTCGCTCGGATGAAAAACTTTATCATCTTCCTCAGGAGGAT
TTTTTAGCAGCTTCTTTTCTAAACTGGCAGGGAAAACTCACAGCCCCTCAGCAATATATATCTGATACTCTAGTCAAATT
ACATCAGCAACAAAAAACGGTGCTGGTACAGGCTGTCACGGGTGCAGGAAAAACTGAAATGATTTATCAGATGATTGATA
ACACCCTTAAAAAAGGAAAAGCTGTAGCTTTAACTAGCCCTCGTATTGATGTCTGTCTAGAACTCTACTATCGCTTAAAG
CGAGATTTTTCTTGTCCCATCTCGCTTTTACACGGAAAAAGTGAGAAATACAGCCGCTCGCCACTCGTAATTGCGACGAC
ACATCAGCTTATGCGTTTTCGTCATGCCTTTGACTTACTCATTTTTGATGAGGTTGATGCTTTTCCATTTCCAGATAATG
ACATGCTTTCTTTTGCACTGACTCAAGCTCGTAAACCTTCTTCAAGCTTGATTTATCTTACTGCAACAACCACCGATAAT
TTGGAAAGACAAGTCAAGTTGGGGCAAATCGAAAAGTTACAACTTCCCCGACGTTTTCATGGTTTTCCATTGGTACTCCC
ACAATTTTTTTGGCAGAGCAAGTTTTATAAAATGGTCAAAAAACAACGCGAATCTGGTTTCCCATTACTTATCTTTGTCC
CTGAAATAAGACTGGGAGAAAAACTGAACCAAGACTTACAGAGTAGTTTTCCTCATGAAAAAATTGCCTTTGTTGCTTCA
ACGAGTCTTGAACGCTTAGAGGCTGTGGAACGTTTTCGCCAGGGCAATATTTCTATCCTTGTCTCAACGACTATTTTAGA
ACGTGGTGTAACTTTTCCTAAGGTTGACGTTTTTGTATTTCAAAGTCATCACCATAATTTCACAAGATCAAGCCTCATCC
AAATTGCTGGACGAGTAGGTCGAAGTACCGAAAGACCTGACGGCAAAGTGTTTTTCTTTCATTTAGGAAAAATAACAGCA
ATGTTGGAAGCTTATAAAAATATCAGAAATATGAATAAGGCAGGAGGTTTCCAATGA

Domains

Predicted by InterproScan.

• Type III restriction enzyme, res subunit (ResIII) (97-236)

• Helicase conserved C-terminal domain (Helicase_C) (274-382)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Lactococcus lactis subsp. cremoris KW2	57.398	93.78	0.538
comFA/cflA	Streptococcus mitis SK321	51.288	100	0.524
comFA/cflA	Streptococcus pneumoniae TIGR4	50.82	100	0.519
comFA/cflA	Streptococcus pneumoniae Rx1	50.82	100	0.519
comFA/cflA	Streptococcus pneumoniae D39	50.82	100	0.519
comFA/cflA	Streptococcus pneumoniae R6	50.82	100	0.519
comFA/cflA	Streptococcus mitis NCTC 12261	50.351	100	0.514
comFA	Bacillus subtilis subsp. subtilis str. 168	37.443	100	0.392
comFA	Latilactobacillus sakei subsp. sakei 23K	38.791	94.976	0.368