Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | L6410_RS02165 | Genome accession | NZ_AP024276 |
| Coordinates | 427676..428170 (+) | Length | 164 a.a. |
| NCBI ID | WP_002942409.1 | Uniprot ID | A0A075SLH4 |
| Organism | Streptococcus parasuis strain SUT-286 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 422676..433170
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6410_RS02135 (SUT286_03870) | - | 422940..423521 (+) | 582 | WP_172006358.1 | phosphoribosylanthranilate isomerase | - |
| L6410_RS02140 (SUT286_03880) | trpB | 423518..424726 (+) | 1209 | WP_024391517.1 | tryptophan synthase subunit beta | - |
| L6410_RS02145 (SUT286_03890) | trpA | 424728..425510 (+) | 783 | WP_237395734.1 | tryptophan synthase subunit alpha | - |
| L6410_RS02150 (SUT286_03900) | - | 425509..426108 (+) | 600 | Protein_385 | family 1 glycosylhydrolase | - |
| L6410_RS02155 (SUT286_03910) | - | 426243..427232 (+) | 990 | WP_237395735.1 | lipoate--protein ligase | - |
| L6410_RS02160 (SUT286_03920) | rpsF | 427374..427664 (+) | 291 | WP_024391536.1 | 30S ribosomal protein S6 | - |
| L6410_RS02165 (SUT286_03930) | ssbA | 427676..428170 (+) | 495 | WP_002942409.1 | single-stranded DNA-binding protein | Machinery gene |
| L6410_RS02170 (SUT286_03940) | rpsR | 428203..428442 (+) | 240 | WP_002939250.1 | 30S ribosomal protein S18 | - |
| L6410_RS02175 (SUT286_03950) | - | 428985..429641 (-) | 657 | WP_237395737.1 | DUF1129 domain-containing protein | - |
| L6410_RS02180 (SUT286_03960) | - | 429657..430601 (-) | 945 | WP_024391538.1 | magnesium transporter CorA family protein | - |
Sequence
Protein
Download Length: 164 a.a. Molecular weight: 18102.87 Da Isoelectric Point: 4.7294
>NTDB_id=84465 L6410_RS02165 WP_002942409.1 427676..428170(+) (ssbA) [Streptococcus parasuis strain SUT-286]
MINNVVLVGRMTRDAELRYTPSNQAVATFTLAVNRNFKNQNGEREADFINVVIWRQQAENLANWAKKGALIGVTGRIQTR
SYDNQQGQRVYVTEVVAESFQLLESRTAREGQGGGYSAGNSFAGGNDYNSPYQAPAQSTPNFAREESPFGASNPMDISDD
DLPF
MINNVVLVGRMTRDAELRYTPSNQAVATFTLAVNRNFKNQNGEREADFINVVIWRQQAENLANWAKKGALIGVTGRIQTR
SYDNQQGQRVYVTEVVAESFQLLESRTAREGQGGGYSAGNSFAGGNDYNSPYQAPAQSTPNFAREESPFGASNPMDISDD
DLPF
Nucleotide
Download Length: 495 bp
>NTDB_id=84465 L6410_RS02165 WP_002942409.1 427676..428170(+) (ssbA) [Streptococcus parasuis strain SUT-286]
ATGATTAATAATGTAGTATTGGTTGGTCGCATGACCCGTGATGCAGAACTTCGTTATACTCCGTCTAACCAGGCTGTTGC
GACTTTTACCTTGGCGGTTAACCGCAATTTTAAAAATCAAAATGGTGAACGTGAAGCGGACTTTATTAACGTAGTCATTT
GGCGCCAACAAGCTGAAAATTTGGCGAATTGGGCTAAAAAAGGTGCGCTGATTGGTGTTACAGGTCGTATTCAGACTCGT
AGCTATGATAACCAACAGGGGCAACGTGTCTACGTTACAGAGGTAGTTGCAGAAAGTTTCCAACTATTGGAAAGCCGTAC
TGCCCGTGAAGGCCAAGGTGGCGGTTATTCAGCTGGTAATTCCTTTGCTGGTGGCAATGATTATAACTCGCCTTATCAAG
CGCCTGCGCAATCTACACCGAACTTCGCTCGAGAAGAAAGTCCATTTGGAGCAAGCAATCCAATGGATATATCAGACGAT
GACCTACCATTCTAG
ATGATTAATAATGTAGTATTGGTTGGTCGCATGACCCGTGATGCAGAACTTCGTTATACTCCGTCTAACCAGGCTGTTGC
GACTTTTACCTTGGCGGTTAACCGCAATTTTAAAAATCAAAATGGTGAACGTGAAGCGGACTTTATTAACGTAGTCATTT
GGCGCCAACAAGCTGAAAATTTGGCGAATTGGGCTAAAAAAGGTGCGCTGATTGGTGTTACAGGTCGTATTCAGACTCGT
AGCTATGATAACCAACAGGGGCAACGTGTCTACGTTACAGAGGTAGTTGCAGAAAGTTTCCAACTATTGGAAAGCCGTAC
TGCCCGTGAAGGCCAAGGTGGCGGTTATTCAGCTGGTAATTCCTTTGCTGGTGGCAATGATTATAACTCGCCTTATCAAG
CGCCTGCGCAATCTACACCGAACTTCGCTCGAGAAGAAAGTCCATTTGGAGCAAGCAATCCAATGGATATATCAGACGAT
GACCTACCATTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
57.558 |
100 |
0.604 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
56.322 |
100 |
0.598 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
55.046 |
66.463 |
0.366 |