Detailed information NTG0843426

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: QRA07_RS17845
• Genome accession: NZ_CP127321
• Coordinates: 3754817..3755677 (+)
• Length: 286 a.a.
• NCBI ID: WP_002114758.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain PC870
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3749817..3760677

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QRA07_RS17825 (QRA07_17870)	secG	3750424..3750753 (-)	330	WP_002115012.1	preprotein translocase subunit SecG	-
QRA07_RS17830 (QRA07_17875)	tpiA	3750766..3751560 (-)	795	WP_233734156.1	triose-phosphate isomerase	-
QRA07_RS17835 (QRA07_17880)	pilB	3751852..3753564 (+)	1713	WP_078224392.1	type IV-A pilus assembly ATPase PilB	Machinery gene
QRA07_RS17840 (QRA07_17885)	pilC	3753591..3754817 (+)	1227	WP_005079343.1	type II secretion system F family protein	Machinery gene
QRA07_RS17845 (QRA07_17890)	pilD	3754817..3755677 (+)	861	WP_002114758.1	A24 family peptidase	Machinery gene
QRA07_RS17850 (QRA07_17895)	coaE	3755679..3756275 (+)	597	WP_005065869.1	dephospho-CoA kinase	-
QRA07_RS17855 (QRA07_17900)	-	3756272..3757186 (-)	915	WP_032063689.1	DMT family transporter	-
QRA07_RS17860 (QRA07_17905)	rlmB	3757222..3757971 (-)	750	WP_005079348.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-
QRA07_RS17865 (QRA07_17910)	-	3758074..3758400 (-)	327	WP_002115102.1	pyrimidine/purine nucleoside phosphorylase	-
QRA07_RS17870 (QRA07_17915)	-	3758477..3759787 (-)	1311	WP_005065861.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 286 a.a.
• Molecular weight: 32168.70 Da
• Isoelectric Point: 7.1044

>NTDB_id=843426 QRA07_RS17845 WP_002114758.1 3754817..3755677(+) (pilD) [Acinetobacter pittii strain PC870]
MQEIIAYFIQNLTALYIAVALLSLCIGSFLNVVIYRTPKMMEQDWQQECQMLLNPELPIIEHEKLTLSKPASSCPACQQP
IRWYQNIPVISWLMLRGKCGHCQHPISIRYPAIELLTMLCSLVVVMVFGPTLQMLWGLVLTWILIALTFIDFDTQLLPDR
FTLPLAALGLGINTFNIYTSPNSAIWGYLIGFLCLWIVYYLFKVITGKEGMGYGDFKLLAALGAWMGPLMLPLIVLLSSL
LGAIIGIILLKLRNDNQPFAFGPYIAIAGWVAFLWGDQIMKIYLGG

Nucleotide

• Length: 861 bp

>NTDB_id=843426 QRA07_RS17845 WP_002114758.1 3754817..3755677(+) (pilD) [Acinetobacter pittii strain PC870]
ATGCAAGAAATTATTGCTTATTTTATTCAAAACTTAACTGCACTTTATATTGCAGTCGCACTATTGAGCCTATGTATTGG
TAGCTTTTTGAATGTGGTAATTTATCGCACCCCCAAAATGATGGAACAAGATTGGCAGCAGGAATGTCAAATGTTGCTTA
ATCCCGAACTACCCATCATTGAGCATGAAAAGCTGACATTAAGTAAACCTGCTTCATCATGTCCTGCATGTCAGCAACCG
ATCCGTTGGTATCAAAATATTCCAGTTATAAGCTGGTTAATGTTAAGAGGAAAATGTGGCCATTGCCAACATCCTATTAG
CATTCGTTATCCAGCGATTGAATTACTCACGATGCTATGTTCATTAGTAGTCGTCATGGTTTTTGGTCCAACCCTACAAA
TGCTTTGGGGGCTAGTGCTCACTTGGATTTTGATTGCTTTAACATTTATAGACTTTGATACTCAGCTACTACCTGACCGT
TTCACCCTACCTTTGGCTGCTCTCGGCTTAGGTATTAATACCTTTAATATTTACACCTCGCCTAACTCAGCCATTTGGGG
ATATTTAATCGGCTTTTTATGTCTTTGGATTGTGTATTACTTATTTAAAGTGATTACAGGCAAAGAAGGTATGGGCTACG
GCGACTTTAAATTGCTTGCCGCATTAGGCGCGTGGATGGGACCATTGATGCTGCCATTAATTGTGCTATTGTCATCTTTA
CTCGGTGCAATTATTGGCATCATTTTACTAAAATTACGTAATGATAATCAGCCCTTTGCGTTTGGGCCATATATTGCCAT
TGCGGGTTGGGTTGCCTTTTTATGGGGTGACCAAATTATGAAAATTTATTTGGGAGGTTAA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-128)

• Type IV leader peptidase family (Peptidase_A24) (138-247)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Acinetobacter baumannii D1279779	96.503	100	0.965
pilD	Acinetobacter nosocomialis M2	96.154	100	0.962
pilD	Vibrio cholerae strain A1552	53.676	95.105	0.51
pilD	Vibrio campbellii strain DS40M4	53.309	95.105	0.507
pilD	Neisseria gonorrhoeae MS11	47.71	91.608	0.437