Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   QRA07_RS04270 Genome accession   NZ_CP127321
Coordinates   876134..876517 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter pittii strain PC870     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 871134..881517
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRA07_RS04260 (QRA07_04260) nolF 874033..875142 (-) 1110 WP_233734755.1 efflux RND transporter periplasmic adaptor subunit -
  QRA07_RS04265 (QRA07_04265) - 875211..875849 (-) 639 WP_017385895.1 hypothetical protein -
  QRA07_RS04270 (QRA07_04270) pilG 876134..876517 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  QRA07_RS04275 (QRA07_04275) pilH 876540..876902 (+) 363 WP_002116220.1 PleD family two-component system response regulator -
  QRA07_RS04280 (QRA07_04280) pilI 876963..877499 (+) 537 WP_002116439.1 chemotaxis protein CheW -
  QRA07_RS04285 (QRA07_04285) pilJ 877542..879620 (+) 2079 WP_233734675.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=843405 QRA07_RS04270 WP_000389061.1 876134..876517(+) (pilG) [Acinetobacter pittii strain PC870]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=843405 QRA07_RS04270 WP_000389061.1 876134..876517(+) (pilG) [Acinetobacter pittii strain PC870]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCAGAAACTTTATT
ACAGCGTGAAGGCTGTGAAGTCATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCGGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGTGCTTTGATAAAAAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37