Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraR   Type   Regulator
Locus tag   QQO14_RS05040 Genome accession   NZ_CP127096
Coordinates   1018053..1018682 (+) Length   209 a.a.
NCBI ID   WP_037551137.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain M1691_10     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1013053..1023682
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QQO14_RS05015 - 1013763..1014620 (-) 858 WP_285491512.1 SDR family oxidoreductase -
  QQO14_RS05020 - 1014689..1015696 (-) 1008 WP_285491513.1 HoxN/HupN/NixA family nickel/cobalt transporter -
  QQO14_RS05025 - 1015908..1016294 (+) 387 WP_285491514.1 hypothetical protein -
  QQO14_RS05030 liaF 1016319..1017020 (+) 702 WP_011275374.1 cell wall-active antibiotics response protein LiaF -
  QQO14_RS05035 vraS 1017017..1018063 (+) 1047 WP_053017422.1 sensor histidine kinase Regulator
  QQO14_RS05040 vraR 1018053..1018682 (+) 630 WP_037551137.1 two-component system response regulator VraR Regulator
  QQO14_RS05045 - 1018745..1019956 (-) 1212 WP_285491516.1 YihY/virulence factor BrkB family protein -
  QQO14_RS05050 - 1020157..1020441 (-) 285 WP_011275378.1 YtxH domain-containing protein -
  QQO14_RS05055 - 1020447..1020911 (-) 465 WP_037537954.1 low molecular weight protein-tyrosine-phosphatase -
  QQO14_RS05060 - 1021053..1021262 (+) 210 WP_080290985.1 DUF1128 domain-containing protein -
  QQO14_RS05065 - 1021276..1022523 (+) 1248 WP_285491518.1 aminopeptidase -
  QQO14_RS05070 - 1022556..1023089 (+) 534 WP_011275382.1 acyl-CoA thioesterase -

Sequence

Protein


Download         Length: 209 a.a.        Molecular weight: 23591.23 Da        Isoelectric Point: 5.0058

>NTDB_id=841736 QQO14_RS05040 WP_037551137.1 1018053..1018682(+) (vraR) [Staphylococcus haemolyticus strain M1691_10]
MTIKVLFVDDHEMVRIGISSYLSTQSDIEIVGEGESGKDAIAKAHELKPDLILMDLLMDDMDGVEATTQIKKDLPHIKVV
MLTSFIEDKEVYRALDAGVDSYILKTTSASDIADAVRKTYNGESVFEPEVLVKMRNRMKKRAELYEMLTEREMEILLLIA
KGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHNLIQ

Nucleotide


Download         Length: 630 bp        

>NTDB_id=841736 QQO14_RS05040 WP_037551137.1 1018053..1018682(+) (vraR) [Staphylococcus haemolyticus strain M1691_10]
ATGACGATTAAAGTTTTGTTCGTTGATGACCATGAAATGGTTAGAATTGGGATATCAAGTTATCTATCAACACAATCTGA
CATTGAGATAGTTGGAGAAGGGGAATCTGGTAAAGATGCCATTGCAAAAGCTCATGAATTAAAACCTGATTTAATTCTTA
TGGATTTATTAATGGATGACATGGATGGCGTTGAAGCAACTACTCAAATCAAAAAAGATTTGCCGCATATTAAAGTTGTA
ATGTTAACTAGTTTTATTGAAGATAAAGAAGTATATAGAGCATTAGATGCTGGTGTAGATAGCTATATTTTAAAAACGAC
TAGTGCTAGTGATATAGCCGACGCAGTACGCAAAACTTATAATGGTGAATCGGTATTTGAACCTGAAGTTTTAGTTAAGA
TGCGTAACAGAATGAAGAAACGTGCAGAATTATATGAAATGCTGACTGAGCGTGAAATGGAAATTTTATTATTAATTGCA
AAAGGGTATTCAAATCAAGAAATAGCGAGTGCTTCTCATATTACAATTAAAACCGTTAAAACTCATGTAAGTAATATATT
GAGTAAATTAGAAGTACAAGATAGAACACAAGCCGTAATTTATGCATTCCAACATAATTTGATTCAATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(5-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-202)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

95.694

100

0.957
  degU Bacillus subtilis subsp. subtilis str. 168

33.929

100

0.364