Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   QQO14_RS05035 Genome accession   NZ_CP127096
Coordinates   1017017..1018063 (+) Length   348 a.a.
NCBI ID   WP_053017422.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain M1691_10     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1012017..1023063
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QQO14_RS05010 map 1012901..1013653 (+) 753 WP_011275369.1 type I methionyl aminopeptidase -
  QQO14_RS05015 - 1013763..1014620 (-) 858 WP_285491512.1 SDR family oxidoreductase -
  QQO14_RS05020 - 1014689..1015696 (-) 1008 WP_285491513.1 HoxN/HupN/NixA family nickel/cobalt transporter -
  QQO14_RS05025 - 1015908..1016294 (+) 387 WP_285491514.1 hypothetical protein -
  QQO14_RS05030 liaF 1016319..1017020 (+) 702 WP_011275374.1 cell wall-active antibiotics response protein LiaF -
  QQO14_RS05035 vraS 1017017..1018063 (+) 1047 WP_053017422.1 sensor histidine kinase Regulator
  QQO14_RS05040 vraR 1018053..1018682 (+) 630 WP_037551137.1 two-component system response regulator VraR Regulator
  QQO14_RS05045 - 1018745..1019956 (-) 1212 WP_285491516.1 YihY/virulence factor BrkB family protein -
  QQO14_RS05050 - 1020157..1020441 (-) 285 WP_011275378.1 YtxH domain-containing protein -
  QQO14_RS05055 - 1020447..1020911 (-) 465 WP_037537954.1 low molecular weight protein-tyrosine-phosphatase -
  QQO14_RS05060 - 1021053..1021262 (+) 210 WP_080290985.1 DUF1128 domain-containing protein -
  QQO14_RS05065 - 1021276..1022523 (+) 1248 WP_285491518.1 aminopeptidase -

Sequence


Protein


Download         Length: 348 a.a.        Molecular weight: 40180.57 Da        Isoelectric Point: 5.8508

>NTDB_id=841735 QQO14_RS05035 WP_053017422.1 1017017..1018063(+) (vraS) [Staphylococcus haemolyticus strain M1691_10]
MNHYLRAIGSMLILVYSMLTAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLVIILLCIIVGSILAYKINQQNQWIKS
QIEHAIEGETVGINDQNIELYNETIDIYQTLVPLNQELHRLRMKTQNLTNENYNMNDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEAPLDQQIPVLEKMVQESQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVIHDI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNQQDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNREDDNNDD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=841735 QQO14_RS05035 WP_053017422.1 1017017..1018063(+) (vraS) [Staphylococcus haemolyticus strain M1691_10]
ATGAACCACTACTTAAGAGCTATCGGTTCAATGCTTATACTAGTTTATAGCATGTTAACCGCGTTCTTATTTATAGATAA
AGTATTTGTTAATATTATCTATTTCCAAGGTATGTTTTATACTCAAATTTTTGGGATACCTGTTTTTCTATTTTTAAATT
TAGTCATCATTTTACTTTGTATTATAGTAGGTTCAATTCTCGCATATAAAATTAATCAACAAAATCAGTGGATTAAGTCG
CAAATCGAGCATGCCATTGAAGGAGAAACAGTAGGTATTAATGATCAAAACATTGAGCTCTATAACGAAACCATAGATAT
TTATCAAACATTAGTTCCGCTGAATCAAGAGTTGCATCGTTTACGAATGAAAACGCAAAACTTAACTAATGAGAATTATA
ATATGAATGATGTCAAAGTTAAGAAAATCATTGAGGATGAACGACAGAGATTAGCTCGCGAGTTACACGACTCTGTTAGT
CAACAACTTTTTGCAGCAAGTATGATGTTATCTGCAATAAAAGAAACAAAATTAGAGGCACCGCTTGATCAACAAATACC
AGTATTAGAGAAAATGGTACAGGAATCTCAACTTGAAATGCGCGCATTGTTACTTCATTTAAGACCTTTAGGACTAAAAG
ATAAATCTCTAGGTGAAGGTATCAAAGATTTAGTTATTGATTTGCAAAAGAAAGTGCCTATGAAAGTCATACACGATATT
CAAGATTTTAAGGTGCCTAAAGGTATAGAAGATCATTTATTTAGAATTACACAAGAGGCTATATCAAATACGTTAAGACA
TTCTAATGGAACTAAAGTTACAGTGGAATTATTTAACCAACAAGATTATCTATTACTTCGAATTCAAGATAATGGTAAAG
GATTCAATGTTGACGAGAAATTAGAACAAAGTTATGGATTAAAAAATATGAGGGAACGCGCATTAGAAATTGGTGCGACA
TTCCATATTGTTTCGTTACCGGATTCTGGAACGAGAATAGAAGTTAAAGCACCGTTAAATAGGGAGGATGATAATAATGA
CGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

91.643

99.713

0.914