Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QMC72_RS13340 Genome accession   NZ_CP127095
Coordinates   2566028..2566978 (-) Length   316 a.a.
NCBI ID   WP_084994566.1    Uniprot ID   -
Organism   Bacillus inaquosorum strain LBA001     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2561028..2571978
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMC72_RS13320 (QMC72_13320) - 2561897..2563315 (+) 1419 WP_268282864.1 MDR family MFS transporter -
  QMC72_RS13325 (QMC72_13325) - 2563361..2564314 (-) 954 WP_019257470.1 siderophore ABC transporter substrate-binding protein -
  QMC72_RS13330 (QMC72_13330) yclP 2564336..2565094 (-) 759 WP_003240196.1 petrobactin ABC transporter ATP-binding protein YclP -
  QMC72_RS13335 (QMC72_13335) yclO 2565088..2566035 (-) 948 WP_060397923.1 petrobactin ABC transporter permease YclO -
  QMC72_RS13340 (QMC72_13340) ceuB 2566028..2566978 (-) 951 WP_084994566.1 petrobactin ABC transporter permease YclN Machinery gene
  QMC72_RS13345 (QMC72_13345) - 2567363..2568736 (+) 1374 WP_268274762.1 aspartate kinase -
  QMC72_RS13350 (QMC72_13350) - 2568879..2568986 (+) 108 WP_019257466.1 YjcZ family sporulation protein -
  QMC72_RS13355 (QMC72_13355) phrC 2569082..2569204 (-) 123 WP_003240188.1 phosphatase RapC inhibitor PhrC Regulator
  QMC72_RS13360 (QMC72_13360) rapC 2569188..2570336 (-) 1149 WP_019257465.1 response regulator aspartate phosphatase RapC Regulator
  QMC72_RS13365 (QMC72_13365) - 2570499..2571914 (-) 1416 WP_284107085.1 HAMP domain-containing sensor histidine kinase -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34832.21 Da        Isoelectric Point: 9.8810

>NTDB_id=841689 QMC72_RS13340 WP_084994566.1 2566028..2566978(-) (ceuB) [Bacillus inaquosorum strain LBA001]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSNQEASTLFASRLPRLISIIIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLMKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGSIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYIFADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLVTSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=841689 QMC72_RS13340 WP_084994566.1 2566028..2566978(-) (ceuB) [Bacillus inaquosorum strain LBA001]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTTACATCTGTATTTATCGGCGTGGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAACCAAGAGGCGTCAACGCTGTTTGCTAGCCGTTTGCCGCGATTGATCAGCATTATCA
TCGCTGGCTTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCTCGGCTCGGCATTTTAATATCCCTGCTGCTGTTTACATCCGCCAGTCCTTTAATGAAAATGCT
GGTTGCGTTTGTCTTTGCCCTTGCAGGAAATTTCTTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACGATCT
TTATTCCGCTTGTCGGGTTAATGCTCGGGAGTATTGTCAGTTCAATCGCGACATTTATTGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTTCAAGGAGACTTCTCTTTAGTCGTAAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATATTTTTGCGGATAAATTCACAGTGGCCGGTATGGGAGAAAGCTTTTCTGTCAACCTTGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGGTCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTCAAGAGCAGCCTGCCGCATAC
TGCGCTATTGGGAGCGGTTTTTGTGCTGTTTTGCGATATATTGGGCAGAATCATTATCTTCCCTTACGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCATATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522