Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   QMC72_RS10780 Genome accession   NZ_CP127095
Coordinates   2045526..2047826 (+) Length   766 a.a.
NCBI ID   WP_119914209.1    Uniprot ID   -
Organism   Bacillus inaquosorum strain LBA001     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2040526..2052826
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMC72_RS10750 (QMC72_10750) pdeH 2042119..2043348 (+) 1230 WP_133486196.1 cyclic di-GMP phosphodiesterase -
  QMC72_RS10755 (QMC72_10755) - 2043324..2043692 (-) 369 WP_084991317.1 hypothetical protein -
  QMC72_RS10760 (QMC72_10760) - 2043805..2043972 (-) 168 WP_119914210.1 hypothetical protein -
  QMC72_RS10765 (QMC72_10765) degQ 2044152..2044292 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  QMC72_RS10770 (QMC72_10770) - 2044477..2045337 (+) 861 WP_148982767.1 polyprenyl synthetase family protein -
  QMC72_RS10775 (QMC72_10775) comX 2045350..2045514 (+) 165 WP_015384519.1 competence pheromone ComX -
  QMC72_RS10780 (QMC72_10780) comP 2045526..2047826 (+) 2301 WP_119914209.1 histidine kinase Regulator
  QMC72_RS10785 (QMC72_10785) comA 2047907..2048551 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  QMC72_RS10790 (QMC72_10790) - 2048570..2048950 (+) 381 WP_284106914.1 hotdog fold thioesterase -
  QMC72_RS10795 (QMC72_10795) mnhG 2048989..2049363 (-) 375 WP_060399388.1 monovalent cation/H(+) antiporter subunit G -
  QMC72_RS10800 (QMC72_10800) - 2049347..2049631 (-) 285 WP_003241049.1 Na(+)/H(+) antiporter subunit F1 -
  QMC72_RS10805 (QMC72_10805) - 2049631..2050107 (-) 477 WP_003241050.1 Na+/H+ antiporter subunit E -
  QMC72_RS10810 (QMC72_10810) - 2050113..2051594 (-) 1482 WP_088112166.1 Na+/H+ antiporter subunit D -
  QMC72_RS10815 (QMC72_10815) - 2051587..2051928 (-) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  QMC72_RS10820 (QMC72_10820) - 2051928..2052359 (-) 432 WP_003241054.1 Na(+)/H(+) antiporter subunit B -

Sequence


Protein


Download         Length: 766 a.a.        Molecular weight: 88394.58 Da        Isoelectric Point: 8.3695

>NTDB_id=841686 QMC72_RS10780 WP_119914209.1 2045526..2047826(+) (comP) [Bacillus inaquosorum strain LBA001]
MKAWYNKVSIFLILVSLVYVSYLTYISSSKLLVGAAVAKNQDNEVVITNIEEFSTAYYSGLQKGDVIKSINNHKVKRPLE
VQKYNSNHVNSIVVERNGAKVKIKPDLMNDGNFTTFVIPLIFYIACLFCCFFILKINESKKLLSALILIIFLLSASLAYL
SAGGSAKGDWLSRCIMVFTLTSVMFNYLLFLYQYFKELGTVLFNKKVFIVYAIPVLNLVFELLRTHLFFRHYVPKINLLS
FFISFIIVSVYFGSILIKSKDTEQAHILKVLTIINILSFSPFLFLYIVPYVFLSTDGISSFIAASFMFLIPFSLVYQFMT
NKIYNVDFILSRLKYYGILALTPTIILVTVFELMGSPAGDYYYFRLAILMYIIMVAVFYYKEVLDFKFRLKRVSEKFNYQ
DSIYKFTQLIRDSTSLTQVFEELKTTILEVSLVSRAHVYEVSADGSIKLYDDEIVNSFEKVYQKEFRKVTPEIGKIVEFN
KGFVMKIGERGGKSFVILCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTI
EEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKDDNPCQEEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGL
VKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDNGVGF
DQEKNNEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2301 bp        

>NTDB_id=841686 QMC72_RS10780 WP_119914209.1 2045526..2047826(+) (comP) [Bacillus inaquosorum strain LBA001]
ATGAAGGCATGGTACAACAAAGTTTCAATTTTTTTGATTTTAGTGAGTTTAGTCTATGTAAGTTATTTAACGTATATAAG
TTCGAGTAAACTTTTAGTTGGTGCAGCAGTAGCCAAAAATCAAGACAATGAAGTTGTAATAACAAATATTGAGGAGTTCT
CTACGGCTTATTATTCAGGACTACAAAAAGGGGACGTCATCAAAAGTATCAATAATCATAAAGTTAAGCGTCCTCTTGAA
GTTCAAAAATACAATTCAAACCATGTGAACTCAATAGTCGTCGAGAGAAATGGAGCAAAGGTTAAAATTAAGCCTGATTT
AATGAATGATGGAAATTTTACTACTTTTGTGATCCCACTAATATTTTATATAGCTTGTCTATTTTGTTGTTTCTTCATTC
TAAAAATAAATGAATCGAAAAAACTACTCTCTGCTTTGATTTTAATAATTTTTTTGTTATCTGCTTCTTTAGCTTATTTA
AGTGCGGGTGGATCTGCAAAGGGAGATTGGTTAAGCAGATGTATAATGGTATTCACTTTAACATCTGTAATGTTTAACTA
TCTTCTTTTCTTATATCAGTATTTTAAAGAGCTAGGCACTGTGTTATTTAACAAAAAAGTTTTTATAGTATATGCAATTC
CAGTACTAAATCTAGTTTTTGAATTGTTGCGAACTCACCTTTTCTTTAGACATTATGTGCCCAAAATAAATTTACTTTCG
TTCTTTATTTCATTTATAATCGTGAGCGTATATTTTGGATCTATTTTAATTAAAAGTAAGGATACTGAACAAGCGCATAT
TTTAAAAGTTCTTACCATAATTAATATTTTATCTTTTTCGCCGTTTTTGTTTTTATATATAGTACCTTATGTATTCTTAA
GCACTGATGGGATTTCTTCTTTTATAGCTGCTTCATTTATGTTCCTAATACCATTTTCTTTGGTTTATCAATTTATGACA
AATAAAATTTATAATGTGGATTTTATTTTAAGTAGGTTAAAATATTATGGAATTTTAGCATTAACGCCCACAATTATTTT
AGTTACTGTATTTGAGTTAATGGGAAGTCCAGCTGGAGATTATTATTATTTCAGACTTGCGATTCTGATGTATATTATTA
TGGTGGCAGTGTTTTATTATAAAGAAGTTCTTGATTTTAAATTTAGATTAAAAAGGGTTTCGGAAAAATTCAATTATCAA
GACAGTATATATAAATTTACGCAGCTGATTAGAGACTCAACTTCCCTGACTCAAGTATTTGAAGAACTGAAAACTACTAT
ACTTGAGGTCTCCCTTGTTAGCCGAGCCCATGTTTATGAAGTTTCAGCTGATGGAAGTATTAAACTATATGATGATGAGA
TCGTAAATTCATTTGAAAAAGTATATCAAAAAGAATTTAGAAAAGTAACACCCGAAATAGGGAAAATCGTTGAATTTAAT
AAAGGCTTTGTCATGAAGATAGGTGAACGCGGTGGTAAATCATTTGTGATTCTTTGTTTATCTAAAATGAATACGCCCCG
TCTCACACTTGAAGAACTTTCTTGGCTGAAAACCTTGGCTTTTTATACAAACGTATCGATCGAAAACGTCATGAAAATTG
AAGAGCTGATGAGTCATTTAGAAGAAATAAAACAACAAGAATCAAATCCAGTGTGGCTTAAGAAACTCATGTACACGATT
GAAGAAAAACAACGTTCTGATCTCGCCCGCGATCTCCACGATTCCGTTCTTCAGGATTTGATTTCCTTAAAGCGCCAGTG
TGAGCTGTTTTTGGCTGATTTTAAGAAGGACGATAATCCGTGCCAGGAAGAGGTGCAGGACAAGCTTGTACAGATGAATG
AGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGATCTTGGGCTG
GTGAAGGCGCTGTCGAAGCTTGTGGCGCAGCAGCAGGAGCGGGTGCCGTTTCATATCCGTTTAAATACGGGCAGATTTAC
GGCTTCGCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCAAGCACTCTC
AGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGACAATGGCGTAGGGTTT
GATCAAGAAAAAAATAATGAGCATTCCATGAGTATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGACG
CCTTCGGATTGAAACAAGTGAAGGAAAGGGATTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

58.226

100

0.591